Information for 23-YTGATAATGGAC (Motif 29)

G A T C A C G T A C T G G T C A A C G T C T G A G C T A A C G T A C T G A T C G C G T A T A G C
Reverse Opposite:
A T C G A C G T A T G C A G T C C G T A C G A T A G C T G T C A A C G T A G T C C G T A C T A G
p-value:1e-7
log p-value:-1.678e+01
Information Content per bp:1.799
Number of Target Sequences with motif37.0
Percentage of Target Sequences with motif0.56%
Number of Background Sequences with motif86.1
Percentage of Background Sequences with motif0.20%
Average Position of motif in Targets92.4 +/- 62.1bp
Average Position of motif in Background110.6 +/- 37.1bp
Strand Bias (log2 ratio + to - strand density)0.2
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

Nkx6.1(Homeobox)/Islet-Nkx6.1-ChIP-Seq(GSE40975)/Homer

Match Rank:1
Score:0.64
Offset:2
Orientation:forward strand
Alignment:YTGATAATGGAC
--GKTAATGR--
 G A T C A C G T A C T G G T C A A C G T C T G A G C T A A C G T A C T G A T C G C G T A T A G C
A C G T A C G T A C T G C A G T A C G T C G T A C G T A A C G T A C T G C T G A A C G T A C G T

Oct6(POU,Homeobox)/NPC-Pou3f1-ChIP-Seq(GSE35496)/Homer

Match Rank:2
Score:0.61
Offset:-1
Orientation:forward strand
Alignment:-YTGATAATGGAC
WATGCAAATGAG-
 A C G T G A T C A C G T A C T G G T C A A C G T C T G A G C T A A C G T A C T G A T C G C G T A T A G C
G C A T C G T A C G A T A C T G A G T C G C T A C T G A C G T A C A G T A C T G C G T A T C A G A C G T

Nanog(Homeobox)/mES-Nanog-ChIP-Seq(GSE11724)/Homer

Match Rank:3
Score:0.60
Offset:2
Orientation:reverse strand
Alignment:YTGATAATGGAC
--GTTAATGGCC
 G A T C A C G T A C T G G T C A A C G T C T G A G C T A A C G T A C T G A T C G C G T A T A G C
A C G T A C G T A T C G A G C T C A G T T C G A C T G A C G A T C A T G C T A G A T G C G A T C

Isl1(Homeobox)/Neuron-Isl1-ChIP-Seq(GSE31456)/Homer

Match Rank:4
Score:0.59
Offset:3
Orientation:forward strand
Alignment:YTGATAATGGAC
---CTAATKGV-
 G A T C A C G T A C T G G T C A A C G T C T G A G C T A A C G T A C T G A T C G C G T A T A G C
A C G T A C G T A C G T A G T C C G A T C T G A C G T A A C G T C A G T T C A G T G A C A C G T

Hoxa10(Homeobox)/ChickenMSG-Hoxa10.Flag-ChIP-Seq(GSE86088)/Homer

Match Rank:5
Score:0.58
Offset:2
Orientation:forward strand
Alignment:YTGATAATGGAC
--GGYAATGAAA
 G A T C A C G T A C T G G T C A A C G T C T G A G C T A A C G T A C T G A T C G C G T A T A G C
A C G T A C G T C T A G T A C G G A C T T G C A T G C A C G A T T A C G C T G A T C G A C T G A

BARX1/MA0875.1/Jaspar

Match Rank:6
Score:0.58
Offset:3
Orientation:reverse strand
Alignment:YTGATAATGGAC
---NTAATTGN-
 G A T C A C G T A C T G G T C A A C G T C T G A G C T A A C G T A C T G A T C G C G T A T A G C
A C G T A C G T A C G T A G T C A C G T C G T A C G T A A C G T A C G T C T A G A G T C A C G T

Brn1(POU,Homeobox)/NPC-Brn1-ChIP-Seq(GSE35496)/Homer

Match Rank:7
Score:0.58
Offset:-1
Orientation:forward strand
Alignment:-YTGATAATGGAC
TATGCWAATBAV-
 A C G T G A T C A C G T A C T G G T C A A C G T C T G A G C T A A C G T A C T G A T C G C G T A T A G C
G A C T C G T A A C G T A C T G A G T C C G T A C T G A C G T A C A G T A C G T G T C A T C A G A C G T

PB0022.1_Gata5_1/Jaspar

Match Rank:8
Score:0.58
Offset:-4
Orientation:forward strand
Alignment:----YTGATAATGGAC-
TAAACTGATAAGAAGAT
 A C G T A C G T A C G T A C G T G A T C A C G T A C T G G T C A A C G T C T G A G C T A A C G T A C T G A T C G C G T A T A G C A C G T
G C A T C G T A C G T A C T G A A G T C G C A T A C T G C G T A C G A T G C T A C G T A T A C G T C G A T C G A C A T G C G T A C A G T

SOX13/MA1120.1/Jaspar

Match Rank:9
Score:0.57
Offset:1
Orientation:forward strand
Alignment:YTGATAATGGAC
-AAACAATGGCA
 G A T C A C G T A C T G G T C A A C G T C T G A G C T A A C G T A C T G A T C G C G T A T A G C
A C G T C T G A T C G A C T G A A G T C G C T A C T G A G C A T C T A G T C A G T G A C G C T A

GATA5/MA0766.1/Jaspar

Match Rank:10
Score:0.57
Offset:1
Orientation:forward strand
Alignment:YTGATAATGGAC
-AGATAAGA---
 G A T C A C G T A C T G G T C A A C G T C T G A G C T A A C G T A C T G A T C G C G T A T A G C
A C G T G C T A A C T G C T G A A C G T G C T A C T G A T A C G T C G A A C G T A C G T A C G T