Information for 6-GTGATGGTTTGT (Motif 4)

C A T G C A G T A C T G C T G A A C G T A C T G C T A G A G C T A G C T A C G T A C T G A C G T
Reverse Opposite:
C G T A T A G C C G T A T C G A C T G A G A T C A G T C C G T A A G C T G T A C G C T A G A T C
p-value:1e-58
log p-value:-1.347e+02
Information Content per bp:1.938
Number of Target Sequences with motif73.0
Percentage of Target Sequences with motif1.11%
Number of Background Sequences with motif31.1
Percentage of Background Sequences with motif0.07%
Average Position of motif in Targets97.5 +/- 61.7bp
Average Position of motif in Background113.6 +/- 59.5bp
Strand Bias (log2 ratio + to - strand density)0.6
Multiplicity (# of sites on avg that occur together)1.01
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

Barx1(Homeobox)/Stomach-Barx1.3xFlag-ChIP-Seq(GSE69483)/Homer

Match Rank:1
Score:0.65
Offset:0
Orientation:reverse strand
Alignment:GTGATGGTTTGT
NTAATKGTTT--
 C A T G C A G T A C T G C T G A A C G T A C T G C T A G A G C T A G C T A C G T A C T G A C G T
A G T C G C A T T C G A T C G A C A G T C A T G T A C G G A C T G A C T A G C T A C G T A C G T

HOXA1(Homeobox)/mES-Hoxa1-ChIP-Seq(SRP084292)/Homer

Match Rank:2
Score:0.60
Offset:1
Orientation:forward strand
Alignment:GTGATGGTTTGT
-TGATKGATGR-
 C A T G C A G T A C T G C T G A A C G T A C T G C T A G A G C T A G C T A C G T A C T G A C G T
A C G T C G A T C T A G C G T A G A C T C A G T C T A G C G T A A G C T C A T G C T A G A C G T

HOXA2(Homeobox)/mES-Hoxa2-ChIP-Seq(Donaldson_et_al.)/Homer

Match Rank:3
Score:0.59
Offset:0
Orientation:reverse strand
Alignment:GTGATGGTTTGT
ATGATKGATGRC
 C A T G C A G T A C T G C T G A A C G T A C T G C T A G A G C T A G C T A C G T A C T G A C G T
C T G A C G A T A T C G C G T A C G A T C A G T C T A G C G T A C G A T A C T G C T G A A T G C

RREB1/MA0073.1/Jaspar

Match Rank:4
Score:0.58
Offset:-6
Orientation:reverse strand
Alignment:------GTGATGGTTTGT--
NGGGGGGGGGTGGTTTGGGG
 A C G T A C G T A C G T A C G T A C G T A C G T C A T G C A G T A C T G C T G A A C G T A C T G C T A G A G C T A G C T A C G T A C T G A C G T A C G T A C G T
A C G T A T C G C A T G A C T G C A T G A C T G A C T G A C T G A C T G A C T G A C G T A C T G C A T G A C G T A C G T A C G T A C T G A C T G A C T G A C T G

Foxd3/MA0041.1/Jaspar

Match Rank:5
Score:0.57
Offset:2
Orientation:forward strand
Alignment:GTGATGGTTTGT--
--GAATGTTTGTTT
 C A T G C A G T A C T G C T G A A C G T A C T G C T A G A G C T A G C T A C G T A C T G A C G T A C G T A C G T
A C G T A C G T C T A G G C T A G C T A G A C T C T A G A C G T C G A T C A G T C T A G G A C T A C G T A G C T

PB0135.1_Hoxa3_2/Jaspar

Match Rank:6
Score:0.57
Offset:-2
Orientation:reverse strand
Alignment:--GTGATGGTTTGT
CCTTAATNGNTTTT
 A C G T A C G T C A T G C A G T A C T G C T G A A C G T A C T G C T A G A G C T A G C T A C G T A C T G A C G T
A G T C A T G C G A C T C G A T C G T A C G T A A C G T T C A G A C T G G C A T C G A T G A C T C A G T A G C T

PB0098.1_Zfp410_1/Jaspar

Match Rank:7
Score:0.55
Offset:-1
Orientation:forward strand
Alignment:-GTGATGGTTTGT----
TATTATGGGATGGATAA
 A C G T C A T G C A G T A C T G C T G A A C G T A C T G C T A G A G C T A G C T A C G T A C T G A C G T A C G T A C G T A C G T A C G T
C G A T T C G A C A G T C G A T G T C A C G A T C A T G C A T G C A T G C T G A C A G T C T A G A C T G T G C A C A G T C G T A T G C A

Foxq1/MA0040.1/Jaspar

Match Rank:8
Score:0.55
Offset:2
Orientation:forward strand
Alignment:GTGATGGTTTGT-
--TATTGTTTATT
 C A T G C A G T A C T G C T G A A C G T A C T G C T A G A G C T A G C T A C G T A C T G A C G T A C G T
A C G T A C G T G A C T C T G A G C A T C G A T A C T G A C G T A C G T A C G T C T G A A C G T C G A T

SOX10/MA0442.2/Jaspar

Match Rank:9
Score:0.54
Offset:4
Orientation:reverse strand
Alignment:GTGATGGTTTGT---
----NNCTTTGTTNN
 C A T G C A G T A C T G C T G A A C G T A C T G C T A G A G C T A G C T A C G T A C T G A C G T A C G T A C G T A C G T
A C G T A C G T A C G T A C G T A C G T A G C T T G A C C G A T C G A T C G A T T C A G C G A T A C G T G A C T G A C T

Sox5/MA0087.1/Jaspar

Match Rank:10
Score:0.54
Offset:3
Orientation:forward strand
Alignment:GTGATGGTTTGT
---ATTGTTA--
 C A T G C A G T A C T G C T G A A C G T A C T G C T A G A G C T A G C T A C G T A C T G A C G T
A C G T A C G T A C G T C G T A A C G T A C G T C T A G A G C T G A C T C G A T A C G T A C G T