Information for 11-SDGCCAATCAGM (Motif 9)

T A C G C T G A C T A G A G T C A G T C C G T A C T G A A C G T T G A C C G T A A C T G T G C A
Reverse Opposite:
A C G T T G A C G C A T A C T G T G C A G A C T G C A T T C A G T A C G G A T C G A C T A T G C
p-value:1e-33
log p-value:-7.828e+01
Information Content per bp:1.636
Number of Target Sequences with motif352.0
Percentage of Target Sequences with motif5.35%
Number of Background Sequences with motif1122.5
Percentage of Background Sequences with motif2.61%
Average Position of motif in Targets99.2 +/- 53.9bp
Average Position of motif in Background89.5 +/- 58.0bp
Strand Bias (log2 ratio + to - strand density)-0.2
Multiplicity (# of sites on avg that occur together)1.09
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

NFYA/MA0060.3/Jaspar

Match Rank:1
Score:0.96
Offset:1
Orientation:forward strand
Alignment:SDGCCAATCAGM
-AACCAATCAGA
 T A C G C T G A C T A G A G T C A G T C C G T A C T G A A C G T T G A C C G T A A C T G T G C A
A C G T T C G A C T G A A G T C G A T C G C T A T C G A G A C T T A G C T C G A T A C G T G C A

NFYB/MA0502.1/Jaspar

Match Rank:2
Score:0.92
Offset:-4
Orientation:forward strand
Alignment:----SDGCCAATCAGM
AAATGGACCAATCAG-
 A C G T A C G T A C G T A C G T T A C G C T G A C T A G A G T C A G T C C G T A C T G A A C G T T G A C C G T A A C T G T G C A
T C G A G T C A G T C A A G C T A T C G T C A G C T G A A G T C A G T C C G T A C T G A A C G T T A G C T C G A T A C G A C G T

NFY(CCAAT)/Promoter/Homer

Match Rank:3
Score:0.89
Offset:1
Orientation:forward strand
Alignment:SDGCCAATCAGM
-AGCCAATCGG-
 T A C G C T G A C T A G A G T C A G T C C G T A C T G A A C G T T G A C C G T A A C T G T G C A
A C G T T C G A C T A G A G T C A G T C C G T A C G T A A C G T T A G C T C A G T A C G A C G T

POL004.1_CCAAT-box/Jaspar

Match Rank:4
Score:0.88
Offset:-2
Orientation:forward strand
Alignment:--SDGCCAATCAGM
ACTAGCCAATCA--
 A C G T A C G T T A C G C T G A C T A G A G T C A G T C C G T A C T G A A C G T T G A C C G T A A C T G T G C A
G T C A A G T C G A C T C T G A C T A G A G T C A G T C C G T A C G T A C G A T T A G C T C G A A C G T A C G T

Dux/MA0611.1/Jaspar

Match Rank:5
Score:0.84
Offset:3
Orientation:forward strand
Alignment:SDGCCAATCAGM
---CCAATCAA-
 T A C G C T G A C T A G A G T C A G T C C G T A C T G A A C G T T G A C C G T A A C T G T G C A
A C G T A C G T A C G T A T G C A G T C C G T A C G T A A C G T A G T C C G T A C G T A A C G T

Pknox1(Homeobox)/ES-Prep1-ChIP-Seq(GSE63282)/Homer

Match Rank:6
Score:0.76
Offset:-1
Orientation:forward strand
Alignment:-SDGCCAATCAGM
SCTGTCAVTCAV-
 A C G T T A C G C T G A C T A G A G T C A G T C C G T A C T G A A C G T T G A C C G T A A C T G T G C A
T A C G A T G C G A C T A C T G A G C T A G T C G T C A T G C A A C G T A G T C G C T A T G C A A C G T

Gfi1/MA0038.1/Jaspar

Match Rank:7
Score:0.74
Offset:3
Orientation:forward strand
Alignment:SDGCCAATCAGM-
---CAAATCACTG
 T A C G C T G A C T A G A G T C A G T C C G T A C T G A A C G T T G A C C G T A A C T G T G C A A C G T
A C G T A C G T A C G T A G T C T G C A C G T A C G T A C A G T G T A C G C T A T A G C G C A T T A C G

PH0026.1_Duxbl/Jaspar

Match Rank:8
Score:0.74
Offset:-1
Orientation:forward strand
Alignment:-SDGCCAATCAGM----
CGACCCAATCAACGGTG
 A C G T T A C G C T G A C T A G A G T C A G T C C G T A C T G A A C G T T G A C C G T A A C T G T G C A A C G T A C G T A C G T A C G T
A G T C C T A G C T G A A G T C A G T C A G T C G T C A G T C A A G C T A G T C C G T A C T G A A G T C T A C G T C A G G C A T T A C G

NFIX/MA0671.1/Jaspar

Match Rank:9
Score:0.73
Offset:-1
Orientation:forward strand
Alignment:-SDGCCAATCAGM
CGTGCCAAG----
 A C G T T A C G C T G A C T A G A G T C A G T C C G T A C T G A A C G T T G A C C G T A A C T G T G C A
T A G C C A T G G C A T A C T G A T G C A G T C T G C A C T G A T A C G A C G T A C G T A C G T A C G T

Pbx3(Homeobox)/GM12878-PBX3-ChIP-Seq(GSE32465)/Homer

Match Rank:10
Score:0.72
Offset:-1
Orientation:forward strand
Alignment:-SDGCCAATCAGM
NCTGTCAATCAN-
 A C G T T A C G C T G A C T A G A G T C A G T C C G T A C T G A A C G T T G A C C G T A A C T G T G C A
T A G C T A G C G A C T C T A G A G C T A G T C G T C A T G C A A C G T A T G C G C T A T G C A A C G T