Information for 10-GAACAGYGAATA (Motif 10)

T C A G G T C A C T G A A G T C C G T A C T A G A G T C C T A G C G T A C G T A C A G T T C G A
Reverse Opposite:
A C G T G C T A G C A T G C A T A G T C T C A G G A T C G C A T A C T G G A C T C A G T A G T C
p-value:1e-6
log p-value:-1.426e+01
Information Content per bp:1.802
Number of Target Sequences with motif9.0
Percentage of Target Sequences with motif0.96%
Number of Background Sequences with motif49.8
Percentage of Background Sequences with motif0.10%
Average Position of motif in Targets110.1 +/- 59.1bp
Average Position of motif in Background104.7 +/- 56.4bp
Strand Bias (log2 ratio + to - strand density)-0.2
Multiplicity (# of sites on avg that occur together)1.44
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

PB0061.1_Sox11_1/Jaspar

Match Rank:1
Score:0.64
Offset:-4
Orientation:forward strand
Alignment:----GAACAGYGAATA-
ATAAGAACAAAGGACTA
 A C G T A C G T A C G T A C G T T C A G G T C A C T G A A G T C C G T A C T A G A G T C C T A G C G T A C G T A C A G T T C G A A C G T
G C T A A C G T C G T A C G T A C T A G T C G A C G T A A G T C C G T A G T C A C G T A C T A G T C A G T C G A A G T C G C A T G C T A

PB0074.1_Sox8_1/Jaspar

Match Rank:2
Score:0.61
Offset:-4
Orientation:reverse strand
Alignment:----GAACAGYGAATA-
TNNAGAACAATANATNN
 A C G T A C G T A C G T A C G T T C A G G T C A C T G A A G T C C G T A C T A G A G T C C T A G C G T A C G T A C A G T T C G A A C G T
G C A T G C T A G T C A C G T A C A T G C T G A C G T A A G T C C G T A C T G A C G A T C G T A T C A G G C T A G C A T G T C A G T A C

ZNF341(Zf)/EBV-ZNF341-ChIP-Seq(GSE113194)/Homer

Match Rank:3
Score:0.61
Offset:-1
Orientation:forward strand
Alignment:-GAACAGYGAATA
GGAACAGCCG---
 A C G T T C A G G T C A C T G A A G T C C G T A C T A G A G T C C T A G C G T A C G T A C A G T T C G A
C T A G A C T G T G C A G T C A A T G C C G T A A T C G A T G C A G T C C T A G A C G T A C G T A C G T

Sox4(HMG)/proB-Sox4-ChIP-Seq(GSE50066)/Homer

Match Rank:4
Score:0.60
Offset:-1
Orientation:reverse strand
Alignment:-GAACAGYGAATA
GGAACAAAGR---
 A C G T T C A G G T C A C T G A A G T C C G T A C T A G A G T C C T A G C G T A C G T A C A G T T C G A
T C A G T C A G T C G A C G T A A G T C C G T A C G T A C G T A A C T G T C A G A C G T A C G T A C G T

PB0063.1_Sox13_1/Jaspar

Match Rank:5
Score:0.60
Offset:-4
Orientation:forward strand
Alignment:----GAACAGYGAATA
TTAAGAACAATAAATT
 A C G T A C G T A C G T A C G T T C A G G T C A C T G A A G T C C G T A C T A G A G T C C T A G C G T A C G T A C A G T T C G A
C G A T G A C T C G T A C T G A C A T G C T G A C G T A G A T C C G T A C T G A G C A T C G T A C G T A C G A T G C A T G C A T

PB0071.1_Sox4_1/Jaspar

Match Rank:6
Score:0.60
Offset:-4
Orientation:forward strand
Alignment:----GAACAGYGAATA-
AGAAGAACAAAGGACTA
 A C G T A C G T A C G T A C G T T C A G G T C A C T G A A G T C C G T A C T A G A G T C C T A G C G T A C G T A C A G T T C G A A C G T
G T C A A C T G C T G A C G T A C T A G T C G A C G T A A G T C C G T A C G T A C G T A C T A G T C A G T C G A A G T C G C A T G C T A

Sox2(HMG)/mES-Sox2-ChIP-Seq(GSE11431)/Homer

Match Rank:7
Score:0.60
Offset:0
Orientation:reverse strand
Alignment:GAACAGYGAATA
GAACAATGGN--
 T C A G G T C A C T G A A G T C C G T A C T A G A G T C C T A G C G T A C G T A C A G T T C G A
C T A G T C G A C G T A A G T C C G T A C G T A C G A T C T A G T C A G T A C G A C G T A C G T

PB0072.1_Sox5_1/Jaspar

Match Rank:8
Score:0.59
Offset:-4
Orientation:forward strand
Alignment:----GAACAGYGAATA
TTTAGAACAATAAAAT
 A C G T A C G T A C G T A C G T T C A G G T C A C T G A A G T C C G T A C T A G A G T C C T A G C G T A C G T A C A G T T C G A
C G A T G C A T C A G T C T G A C T A G T C G A C G T A A G T C C G T A C G T A G C A T C G T A C T G A C G T A G C T A C G A T

Sox17(HMG)/Endoderm-Sox17-ChIP-Seq(GSE61475)/Homer

Match Rank:9
Score:0.59
Offset:-1
Orientation:reverse strand
Alignment:-GAACAGYGAATA
VRAACAATGG---
 A C G T T C A G G T C A C T G A A G T C C G T A C T A G A G T C C T A G C G T A C G T A C A G T T C G A
T G A C C T G A T C G A C G T A T A G C G T C A T C G A G C A T C T A G T A C G A C G T A C G T A C G T

AR-halfsite(NR)/LNCaP-AR-ChIP-Seq(GSE27824)/Homer

Match Rank:10
Score:0.59
Offset:-4
Orientation:forward strand
Alignment:----GAACAGYGAATA
CCAGGAACAG------
 A C G T A C G T A C G T A C G T T C A G G T C A C T G A A G T C C G T A C T A G A G T C C T A G C G T A C G T A C A G T T C G A
T A G C G T A C C G T A C T A G A C T G T G C A C G T A A T G C C G T A A T C G A C G T A C G T A C G T A C G T A C G T A C G T