Information for 14-GGACAGATGCAT (Motif 16)

A C T G A C T G C G T A A G T C C G T A C A T G C G T A A C G T A C T G A G T C C G T A A C G T
Reverse Opposite:
C G T A A C G T A C T G A G T C C G T A A C G T G A T C A C G T A C T G A C G T A G T C A G T C
p-value:1e-3
log p-value:-8.622e+00
Information Content per bp:1.955
Number of Target Sequences with motif2.0
Percentage of Target Sequences with motif0.21%
Number of Background Sequences with motif1.6
Percentage of Background Sequences with motif0.00%
Average Position of motif in Targets107.0 +/- 59.1bp
Average Position of motif in Background167.8 +/- 2.2bp
Strand Bias (log2 ratio + to - strand density)10.0
Multiplicity (# of sites on avg that occur together)3.50
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

Bhlha15/MA0607.1/Jaspar

Match Rank:1
Score:0.66
Offset:2
Orientation:reverse strand
Alignment:GGACAGATGCAT
--ACATATGG--
 A C T G A C T G C G T A A G T C C G T A C A T G C G T A A C G T A C T G A G T C C G T A A C G T
A C G T A C G T T C G A A G T C C G T A A C G T G T C A A C G T A C T G A T C G A C G T A C G T

NEUROD1/MA1109.1/Jaspar

Match Rank:2
Score:0.65
Offset:0
Orientation:forward strand
Alignment:GGACAGATGCAT-
GGACAGATGGCAG
 A C T G A C T G C G T A A G T C C G T A C A T G C G T A A C G T A C T G A G T C C G T A A C G T A C G T
C A T G T C A G T C G A T G A C C G T A A C T G T G C A G C A T C A T G A C T G A G T C T C G A T A C G

NeuroG2(bHLH)/Fibroblast-NeuroG2-ChIP-Seq(GSE75910)/Homer

Match Rank:3
Score:0.64
Offset:1
Orientation:reverse strand
Alignment:GGACAGATGCAT
-AACAGATGGT-
 A C T G A C T G C G T A A G T C C G T A C A T G C G T A A C G T A C T G A G T C C G T A A C G T
A C G T T C G A T C G A A G T C C G T A A C T G G T C A G C A T A C T G A C T G A G C T A C G T

Myod1/MA0499.1/Jaspar

Match Rank:4
Score:0.64
Offset:-2
Orientation:reverse strand
Alignment:--GGACAGATGCAT
NGNGACAGCTGCN-
 A C G T A C G T A C T G A C T G C G T A A G T C C G T A C A T G C G T A A C G T A C T G A G T C C G T A A C G T
T C G A T C A G A T C G T C A G T C G A A G T C C G T A A C T G T A G C C G A T A C T G A T G C C G T A A C G T

Pit1(Homeobox)/GCrat-Pit1-ChIP-Seq(GSE58009)/Homer

Match Rank:5
Score:0.64
Offset:2
Orientation:reverse strand
Alignment:GGACAGATGCAT
--GHATATKCAT
 A C T G A C T G C G T A A G T C C G T A C A T G C G T A A C G T A C T G A G T C C G T A A C G T
A C G T A C G T C T A G G T A C C G T A G A C T C T G A C G A T C A T G G A T C C G T A C G A T

Olig2(bHLH)/Neuron-Olig2-ChIP-Seq(GSE30882)/Homer

Match Rank:6
Score:0.62
Offset:1
Orientation:reverse strand
Alignment:GGACAGATGCAT
-AACAKATGGY-
 A C T G A C T G C G T A A G T C C G T A C A T G C G T A A C G T A C T G A G T C C G T A A C G T
A C G T C T G A T G C A A G T C T C G A A C T G T G C A G C A T A C T G A C T G G A C T A C G T

TCF4(bHLH)/SHSY5Y-TCF4-ChIP-Seq(GSE96915)/Homer

Match Rank:7
Score:0.62
Offset:1
Orientation:reverse strand
Alignment:GGACAGATGCAT
-DMCAGATGKS-
 A C T G A C T G C G T A A G T C C G T A C A T G C G T A A C G T A C T G A G T C C G T A A C G T
A C G T C G T A T G A C A G T C C G T A A C T G G T C A A C G T A C T G A C G T A T G C A C G T

Tcf12/MA0521.1/Jaspar

Match Rank:8
Score:0.62
Offset:1
Orientation:forward strand
Alignment:GGACAGATGCAT
-AACAGCTGCAG
 A C T G A C T G C G T A A G T C C G T A C A T G C G T A A C G T A C T G A G T C C G T A A C G T
A C G T T C G A T C G A A G T C C G T A C T A G T A G C A C G T A C T G T A G C C G T A T A C G

Twist2(bHLH)/Myoblast-Twist2.Ty1-ChIP-Seq(GSE127998)/Homer

Match Rank:9
Score:0.61
Offset:0
Orientation:reverse strand
Alignment:GGACAGATGCAT
DRVCAGCTGK--
 A C T G A C T G C G T A A G T C C G T A C A T G C G T A A C G T A C T G A G T C C G T A A C G T
C A T G C T G A T G C A A G T C C G T A A C T G T G A C A C G T A C T G A C T G A C G T A C G T

Ascl1(bHLH)/NeuralTubes-Ascl1-ChIP-Seq(GSE55840)/Homer

Match Rank:10
Score:0.61
Offset:-1
Orientation:forward strand
Alignment:-GGACAGATGCAT
NNVVCAGCTGBN-
 A C G T A C T G A C T G C G T A A G T C C G T A C A T G C G T A A C G T A C T G A G T C C G T A A C G T
C T A G A G T C T A C G T A C G T G A C C G T A A C T G T A G C G C A T C A T G A T G C A G C T A C G T