Information for 16-GATTCACACG (Motif 20)

A C T G C G T A A C G T A C G T A G T C C G T A A G T C C G T A A G T C A C T G
Reverse Opposite:
A G T C A C T G A C G T A C T G A C G T A C T G C G T A C G T A A C G T A G T C
p-value:1e-2
log p-value:-6.450e+00
Information Content per bp:1.530
Number of Target Sequences with motif2.0
Percentage of Target Sequences with motif0.21%
Number of Background Sequences with motif4.0
Percentage of Background Sequences with motif0.01%
Average Position of motif in Targets123.6 +/- 47.4bp
Average Position of motif in Background127.0 +/- 52.5bp
Strand Bias (log2 ratio + to - strand density)10.0
Multiplicity (# of sites on avg that occur together)2.50
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

TBX21/MA0690.1/Jaspar

Match Rank:1
Score:0.71
Offset:2
Orientation:reverse strand
Alignment:GATTCACACG--
--TTCACACCTT
 A C T G C G T A A C G T A C G T A G T C C G T A A G T C C G T A A G T C A C T G A C G T A C G T
A C G T A C G T C G A T A G C T T G A C C T G A G T A C T C G A T G A C G A T C G A C T G A C T

TBR1/MA0802.1/Jaspar

Match Rank:2
Score:0.70
Offset:1
Orientation:reverse strand
Alignment:GATTCACACG-
-TTTCACACCT
 A C T G C G T A A C G T A C G T A G T C C G T A A G T C C G T A A G T C A C T G A C G T
A C G T C G A T C G A T G A C T T G A C C T G A T A G C T C G A T A G C G A T C G A C T

TBX2/MA0688.1/Jaspar

Match Rank:3
Score:0.69
Offset:1
Orientation:reverse strand
Alignment:GATTCACACG--
-TTTCACACCTN
 A C T G C G T A A C G T A C G T A G T C C G T A A G T C C G T A A G T C A C T G A C G T A C G T
A C G T G C A T G C A T G A C T T G A C C T G A G A T C T C G A T A G C A G T C G A C T G C A T

PB0044.1_Mtf1_1/Jaspar

Match Rank:4
Score:0.69
Offset:-2
Orientation:reverse strand
Alignment:--GATTCACACG----
NNTTTGCACACGGCCC
 A C G T A C G T A C T G C G T A A C G T A C G T A G T C C G T A A G T C C G T A A G T C A C T G A C G T A C G T A C G T A C G T
C G A T G A C T C A G T A C G T G A C T A C T G G A T C C T G A A G T C G C T A G A T C A C T G C T A G G A T C T A G C G T A C

PBX2/MA1113.1/Jaspar

Match Rank:5
Score:0.68
Offset:-2
Orientation:forward strand
Alignment:--GATTCACACG
GTGATTGACAGG
 A C G T A C G T A C T G C G T A A C G T A C G T A G T C C G T A A G T C C G T A A G T C A C T G
T C A G C G A T C A T G C T G A A C G T C A G T A C T G C T G A A G T C C T G A A T C G T A C G

MGA/MA0801.1/Jaspar

Match Rank:6
Score:0.68
Offset:3
Orientation:reverse strand
Alignment:GATTCACACG-
---TCACACCT
 A C T G C G T A A C G T A C G T A G T C C G T A A G T C C G T A A G T C A C T G A C G T
A C G T A C G T A C G T G A C T T G A C C T G A G A T C T C G A T A G C A G T C G A C T

Tbx21(T-box)/GM12878-TBX21-ChIP-Seq(Encode)/Homer

Match Rank:7
Score:0.68
Offset:1
Orientation:reverse strand
Alignment:GATTCACACG-
-TTTCACACCT
 A C T G C G T A A C G T A C G T A G T C C G T A A G T C C G T A A G T C A C T G A C G T
A C G T A C G T G C A T G A C T T A G C C G T A G A T C C G T A T G A C G A T C G A C T

EOMES/MA0800.1/Jaspar

Match Rank:8
Score:0.68
Offset:-1
Orientation:reverse strand
Alignment:-GATTCACACG--
NTTTTCACACCTT
 A C G T A C T G C G T A A C G T A C G T A G T C C G T A A G T C C G T A A G T C A C T G A C G T A C G T
C T G A G C A T C A G T C G A T A G C T T G A C C T G A A G T C T C G A T G A C G A T C G A C T G A C T

Eomes(T-box)/H9-Eomes-ChIP-Seq(GSE26097)/Homer

Match Rank:9
Score:0.67
Offset:1
Orientation:forward strand
Alignment:GATTCACACG-
-ATTAACACCT
 A C T G C G T A A C G T A C G T A G T C C G T A A G T C C G T A A G T C A C T G A C G T
A C G T G C T A G A C T G A C T T G C A C G T A A G T C C G T A T A G C G A T C G A C T

TBX20/MA0689.1/Jaspar

Match Rank:10
Score:0.67
Offset:1
Orientation:reverse strand
Alignment:GATTCACACG--
-CTTCACACCTA
 A C T G C G T A A C G T A C G T A G T C C G T A A G T C C G T A A G T C A C T G A C G T A C G T
A C G T A G T C G C A T G C A T G T A C G T C A T G A C G T C A G T A C A G T C G A C T G C T A