Information for 16-CTTTAGGATGTT (Motif 21)

A G T C A C G T A C G T A C G T C G T A A C T G A C T G C G T A A C G T A C T G A G C T A C G T
Reverse Opposite:
C G T A C T G A A G T C C G T A A C G T A G T C A G T C A C G T C G T A C G T A C G T A A C T G
p-value:1e-2
log p-value:-6.450e+00
Information Content per bp:1.969
Number of Target Sequences with motif2.0
Percentage of Target Sequences with motif0.21%
Number of Background Sequences with motif3.4
Percentage of Background Sequences with motif0.01%
Average Position of motif in Targets139.8 +/- 36.2bp
Average Position of motif in Background88.9 +/- 66.6bp
Strand Bias (log2 ratio + to - strand density)2.3
Multiplicity (# of sites on avg that occur together)3.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

PB0181.1_Spdef_2/Jaspar

Match Rank:1
Score:0.72
Offset:-1
Orientation:reverse strand
Alignment:-CTTTAGGATGTT---
CTACTAGGATGTNNTN
 A C G T A G T C A C G T A C G T A C G T C G T A A C T G A C T G C G T A A C G T A C T G A G C T A C G T A C G T A C G T A C G T
A G T C G C A T C G T A T G A C C G A T T C G A T A C G C A T G C G T A G A C T C T A G G A C T C G A T T C G A G C A T G A T C

PH0066.1_Hoxc11/Jaspar

Match Rank:2
Score:0.59
Offset:-3
Orientation:reverse strand
Alignment:---CTTTAGGATGTT-
NNNTTTTACGACNTTN
 A C G T A C G T A C G T A G T C A C G T A C G T A C G T C G T A A C T G A C T G C G T A A C G T A C T G A G C T A C G T A C G T
G T A C G A C T C T G A C G A T C G A T C G A T C G A T C G T A A G T C C A T G C T G A A G T C G A C T C G A T G A C T C T G A

HOXD11/MA0908.1/Jaspar

Match Rank:3
Score:0.58
Offset:-1
Orientation:reverse strand
Alignment:-CTTTAGGATGTT
NTTTTACGAC---
 A C G T A G T C A C G T A C G T A C G T C G T A A C T G A C T G C G T A A C G T A C T G A G C T A C G T
C G A T C G A T C G A T C G A T C G A T C G T A A G T C C T A G C G T A A G T C A C G T A C G T A C G T

PH0065.1_Hoxc10/Jaspar

Match Rank:4
Score:0.58
Offset:-3
Orientation:reverse strand
Alignment:---CTTTAGGATGTT-
ANNTTTTACGACNTNN
 A C G T A C G T A C G T A G T C A C G T A C G T A C G T C G T A A C T G A C T G C G T A A C G T A C T G A G C T A C G T A C G T
T G C A T A G C C T A G G C A T C A G T C G A T C G A T C G T A A G T C A C T G C T G A A G T C G A C T G C A T G C A T C G T A

PH0047.1_Hoxa11/Jaspar

Match Rank:5
Score:0.58
Offset:-3
Orientation:reverse strand
Alignment:---CTTTAGGATGTT-
NNGTTTTACGACTTTA
 A C G T A C G T A C G T A G T C A C G T A C G T A C G T C G T A A C T G A C T G C G T A A C G T A C T G A G C T A C G T A C G T
G T C A G A C T C T A G C G A T C A G T C G A T C G A T C G T A A G T C C A T G C T G A A G T C G A C T C G A T G A C T C G T A

HOXC10/MA0905.1/Jaspar

Match Rank:6
Score:0.58
Offset:-1
Orientation:reverse strand
Alignment:-CTTTAGGATGTT
NTTTTACGAC---
 A C G T A G T C A C G T A C G T A C G T C G T A A C T G A C T G C G T A A C G T A C T G A G C T A C G T
C G T A C G A T G C A T G C A T C G A T C G T A G A T C C A T G C T G A A G T C A C G T A C G T A C G T

PH0077.1_Hoxd12/Jaspar

Match Rank:7
Score:0.57
Offset:-4
Orientation:reverse strand
Alignment:----CTTTAGGATGTT-
NNNATTTTACGACNNTN
 A C G T A C G T A C G T A C G T A G T C A C G T A C G T A C G T C G T A A C T G A C T G C G T A A C G T A C T G A G C T A C G T A C G T
G T C A C G T A C T A G C T G A C G A T C G A T C G A T C G A T C G T A A G T C C A T G C T G A A G T C A G T C G A C T C G A T C T A G

PH0068.1_Hoxc13/Jaspar

Match Rank:8
Score:0.55
Offset:-3
Orientation:reverse strand
Alignment:---CTTTAGGATGTT-
NAATTTTACGAGNTNN
 A C G T A C G T A C G T A G T C A C G T A C G T A C G T C G T A A C T G A C T G C G T A A C G T A C T G A G C T A C G T A C G T
G C T A C T G A C G T A C G A T C G A T C G A T C G A T C T G A G A T C C T A G C T G A A T C G T G A C C G A T C G A T C G A T

CDX4(Homeobox)/ZebrafishEmbryos-Cdx4.Myc-ChIP-Seq(GSE48254)/Homer

Match Rank:9
Score:0.55
Offset:-2
Orientation:reverse strand
Alignment:--CTTTAGGATGTT
DGWTTTATGRCN--
 A C G T A C G T A G T C A C G T A C G T A C G T C G T A A C T G A C T G C G T A A C G T A C T G A G C T A C G T
C A G T C A T G G C A T C G A T C G A T C G A T C T G A A G C T C A T G C T A G A G T C A T G C A C G T A C G T

PH0067.1_Hoxc12/Jaspar

Match Rank:10
Score:0.55
Offset:-4
Orientation:reverse strand
Alignment:----CTTTAGGATGTT-
GNNNTTTTACGACCTNA
 A C G T A C G T A C G T A C G T A G T C A C G T A C G T A C G T C G T A A C T G A C T G C G T A A C G T A C T G A G C T A C G T A C G T
C T A G G C T A T C G A C G T A C G A T C A G T C G A T C G A T C G T A A G T C C A T G C T G A A G T C A G T C A G C T C G T A C T G A