Information for 2-CACDGTGT (Motif 6)

A G T C G T C A G T A C C G T A C T A G C G A T A T C G A C G T
Reverse Opposite:
C G T A A T G C C G T A A G T C G C A T A C T G A C G T C T A G
p-value:1e-9
log p-value:-2.113e+01
Information Content per bp:1.759
Number of Target Sequences with motif85.0
Percentage of Target Sequences with motif9.09%
Number of Background Sequences with motif2166.2
Percentage of Background Sequences with motif4.43%
Average Position of motif in Targets98.2 +/- 51.6bp
Average Position of motif in Background98.3 +/- 56.6bp
Strand Bias (log2 ratio + to - strand density)0.4
Multiplicity (# of sites on avg that occur together)1.03
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

Ar/MA0007.3/Jaspar

Match Rank:1
Score:0.66
Offset:-5
Orientation:forward strand
Alignment:-----CACDGTGT----
GGGAACACGGTGTACCC
 A C G T A C G T A C G T A C G T A C G T A G T C G T C A G T A C C G T A C T A G C G A T A T C G A C G T A C G T A C G T A C G T A C G T
C T A G C T A G C T A G G C T A G T C A T A G C T C G A A G T C T A C G T C A G G A C T A T C G G C A T C G T A G A T C G A T C G A T C

NR3C2/MA0727.1/Jaspar

Match Rank:2
Score:0.65
Offset:-5
Orientation:forward strand
Alignment:-----CACDGTGT----
GGGAACACAATGTTCCC
 A C G T A C G T A C G T A C G T A C G T A G T C G T C A G T A C C G T A C T A G C G A T A T C G A C G T A C G T A C G T A C G T A C G T
C A T G C T A G C A T G C G T A T G C A A T G C C T G A G A T C C G T A C T G A G A C T A T C G G A C T G C A T G A T C A G T C G T A C

NR3C1/MA0113.3/Jaspar

Match Rank:3
Score:0.64
Offset:-5
Orientation:forward strand
Alignment:-----CACDGTGT----
GGGTACATAATGTTCCC
 A C G T A C G T A C G T A C G T A C G T A G T C G T C A G T A C C G T A C T A G C G A T A T C G A C G T A C G T A C G T A C G T A C G T
C T A G C T A G C T A G C G A T C G T A A T G C C T G A G A C T C G T A C T G A G A C T A T C G A C G T G C A T G A T C G A T C G T A C

GRE(NR),IR3/RAW264.7-GRE-ChIP-Seq(Unpublished)/Homer

Match Rank:4
Score:0.64
Offset:-3
Orientation:reverse strand
Alignment:---CACDGTGT----
GRACAGWMTGTYCTB
 A C G T A C G T A C G T A G T C G T C A G T A C C G T A C T A G C G A T A T C G A C G T A C G T A C G T A C G T A C G T
C T A G C T G A C T G A T A G C C G T A A T C G C G T A T G C A G A C T T C A G G C A T G A C T G A T C G A C T A C T G

ARE(NR)/LNCAP-AR-ChIP-Seq(GSE27824)/Homer

Match Rank:5
Score:0.63
Offset:-4
Orientation:forward strand
Alignment:----CACDGTGT----
AGNACAGNCTGTTCTN
 A C G T A C G T A C G T A C G T A G T C G T C A G T A C C G T A C T A G C G A T A T C G A C G T A C G T A C G T A C G T A C G T
C T G A C T A G T C G A C G T A A T G C C G T A A T C G C G A T T A G C G C A T A T C G G C A T A G C T G A T C G A C T A G C T

PGR(NR)/EndoStromal-PGR-ChIP-Seq(GSE69539)/Homer

Match Rank:6
Score:0.62
Offset:-3
Orientation:reverse strand
Alignment:---CACDGTGT----
GAACADWATGTTCTT
 A C G T A C G T A C G T A G T C G T C A G T A C C G T A C T A G C G A T A T C G A C G T A C G T A C G T A C G T A C G T
C T A G C G T A C G T A A G T C C G T A C A G T C G T A G T C A C G A T A C T G A C G T G C A T A G T C G A C T G C A T

GRE(NR),IR3/A549-GR-ChIP-Seq(GSE32465)/Homer

Match Rank:7
Score:0.62
Offset:-5
Orientation:forward strand
Alignment:-----CACDGTGT---
NAGNACANNNTGTNCT
 A C G T A C G T A C G T A C G T A C G T A G T C G T C A G T A C C G T A C T A G C G A T A T C G A C G T A C G T A C G T A C G T
T A C G C T G A C T A G T C G A C G T A A G T C C T G A A T C G G C A T T A G C G A C T A C T G A C G T A G C T A G T C G A C T

ZSCAN4/MA1155.1/Jaspar

Match Rank:8
Score:0.61
Offset:-4
Orientation:reverse strand
Alignment:----CACDGTGT---
TTTTCAGTGTGTGCA
 A C G T A C G T A C G T A C G T A G T C G T C A G T A C C G T A C T A G C G A T A T C G A C G T A C G T A C G T A C G T
G A C T G A C T C A G T G C A T T G A C T G C A C A T G A C G T C T A G G A C T A C T G C G A T A T C G A G T C C T G A

TBX5/MA0807.1/Jaspar

Match Rank:9
Score:0.61
Offset:2
Orientation:forward strand
Alignment:CACDGTGT--
--AGGTGTGA
 A G T C G T C A G T A C C G T A C T A G C G A T A T C G A C G T A C G T A C G T
A C G T A C G T C T G A T C A G A C T G A C G T C T A G A G C T A C T G C T G A

TBX2/MA0688.1/Jaspar

Match Rank:10
Score:0.60
Offset:1
Orientation:forward strand
Alignment:CACDGTGT----
-AAGGTGTGAAA
 A G T C G T C A G T A C C G T A C T A G C G A T A T C G A C G T A C G T A C G T A C G T A C G T
A C G T C G T A C T G A T C A G A T C G A G C T C T A G G A C T A C T G C T G A C G T A C G T A