Information for 6-AAGAGTTA (Motif 15)

C G T A C G T A A C T G C G T A A C T G A C G T A C G T C T G A
Reverse Opposite:
A G C T C G T A C G T A A G T C A C G T A G T C A C G T C G A T
p-value:1e-4
log p-value:-9.399e+00
Information Content per bp:1.938
Number of Target Sequences with motif7.0
Percentage of Target Sequences with motif10.29%
Number of Background Sequences with motif678.9
Percentage of Background Sequences with motif1.53%
Average Position of motif in Targets130.7 +/- 47.6bp
Average Position of motif in Background101.1 +/- 72.0bp
Strand Bias (log2 ratio + to - strand density)0.0
Multiplicity (# of sites on avg that occur together)1.43
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

ZNF652/HepG2-ZNF652.Flag-ChIP-Seq(Encode)/Homer

Match Rank:1
Score:0.80
Offset:-6
Orientation:reverse strand
Alignment:------AAGAGTTA-
NMMNBAAAGGGTTAA
 A C G T A C G T A C G T A C G T A C G T A C G T C G T A C G T A A C T G C G T A A C T G A C G T A C G T C T G A A C G T
T A C G T G C A G T C A G C A T A C T G T G C A T C G A C T G A C A T G C T A G A C T G C A G T G A C T C G T A G T C A

HMBOX1/MA0895.1/Jaspar

Match Rank:2
Score:0.61
Offset:0
Orientation:forward strand
Alignment:AAGAGTTA--
ACTAGTTAAC
 C G T A C G T A A C T G C G T A A C T G A C G T A C G T C T G A A C G T A C G T
T G C A A G T C C G A T C T G A A T C G C G A T G C A T C G T A G T C A T A G C

PB0046.1_Mybl1_1/Jaspar

Match Rank:3
Score:0.60
Offset:-5
Orientation:forward strand
Alignment:-----AAGAGTTA----
TTGAAAACCGTTAATTT
 A C G T A C G T A C G T A C G T A C G T C G T A C G T A A C T G C G T A A C T G A C G T A C G T C T G A A C G T A C G T A C G T A C G T
G A C T C G A T C A T G C G T A G C T A C T G A C T G A G T A C A T G C A C T G A C G T G A C T C T G A G C T A G C A T G A C T C G A T

Nr2e1/MA0676.1/Jaspar

Match Rank:4
Score:0.59
Offset:0
Orientation:forward strand
Alignment:AAGAGTTA-
AAAAGTCAA
 C G T A C G T A A C T G C G T A A C T G A C G T A C G T C T G A A C G T
G C T A C T G A C T G A C T G A C T A G A G C T A G T C C G T A G C T A

Barx1(Homeobox)/Stomach-Barx1.3xFlag-ChIP-Seq(GSE69483)/Homer

Match Rank:5
Score:0.59
Offset:-1
Orientation:forward strand
Alignment:-AAGAGTTA-
AAACMATTAN
 A C G T C G T A C G T A A C T G C G T A A C T G A C G T A C G T C T G A A C G T
T C G A C T G A C T G A A T G C G T A C G T C A A G C T A G C T C G T A T C A G

MYNN(Zf)/HEK293-MYNN.eGFP-ChIP-Seq(Encode)/Homer

Match Rank:6
Score:0.59
Offset:-8
Orientation:forward strand
Alignment:--------AAGAGTTA
TTCAAAWTAAAAGTC-
 A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T C G T A C G T A A C T G C G T A A C T G A C G T A C G T C T G A
C A G T G A C T A G T C G C T A C T G A G T C A C G T A A G C T G T C A C T G A C T G A C T G A A C T G A G C T G A T C A C G T

PB0045.1_Myb_1/Jaspar

Match Rank:7
Score:0.58
Offset:-5
Orientation:forward strand
Alignment:-----AAGAGTTA----
ATGGAAACCGTTATTTT
 A C G T A C G T A C G T A C G T A C G T C G T A C G T A A C T G C G T A A C T G A C G T A C G T C T G A A C G T A C G T A C G T A C G T
G C T A C G A T C A T G C A T G G T C A C T G A C T G A G T A C A T G C A C T G A C G T G A C T C T G A G C A T G C A T G A C T C G A T

NFE2/MA0841.1/Jaspar

Match Rank:8
Score:0.57
Offset:-1
Orientation:reverse strand
Alignment:-AAGAGTTA--
GATGAGTCATN
 A C G T C G T A C G T A A C T G C G T A A C T G A C G T A C G T C T G A A C G T A C G T
T A C G T C G A A C G T C T A G T C G A A T C G C A G T G T A C C T G A A G C T A C T G

Nkx2.1(Homeobox)/LungAC-Nkx2.1-ChIP-Seq(GSE43252)/Homer

Match Rank:9
Score:0.57
Offset:-3
Orientation:reverse strand
Alignment:---AAGAGTTA
CTYRAGTGSY-
 A C G T A C G T A C G T C G T A C G T A A C T G C G T A A C T G A C G T A C G T C T G A
A T G C G C A T A G C T C T A G C G T A A C T G C G A T C T A G A T G C G A T C A C G T

JDP2/MA0655.1/Jaspar

Match Rank:10
Score:0.57
Offset:0
Orientation:reverse strand
Alignment:AAGAGTTA-
ATGAGTCAT
 C G T A C G T A A C T G C G T A A C T G A C G T A C G T C T G A A C G T
C T G A C G A T C A T G G C T A A T C G G C A T T G A C C T G A A G C T