Information for 16-GCCTGAGGMTGM (Motif 16)

A T C G G T A C A T G C G C A T T A C G T C G A T A C G A T C G T G C A C A G T A T C G G T C A
Reverse Opposite:
C A G T T A G C G T C A A C G T T A G C A T G C A G C T A T G C C G T A A T C G C A T G T A G C
p-value:1e-3
log p-value:-9.077e+00
Information Content per bp:1.566
Number of Target Sequences with motif2.0
Percentage of Target Sequences with motif2.94%
Number of Background Sequences with motif10.9
Percentage of Background Sequences with motif0.02%
Average Position of motif in Targets111.6 +/- 41.3bp
Average Position of motif in Background108.8 +/- 42.4bp
Strand Bias (log2 ratio + to - strand density)10.0
Multiplicity (# of sites on avg that occur together)3.50
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

TFAP2B(var.2)/MA0812.1/Jaspar

Match Rank:1
Score:0.85
Offset:-1
Orientation:reverse strand
Alignment:-GCCTGAGGMTGM
TGCCTGAGGCN--
A C G T A T C G G T A C A T G C G C A T T A C G T C G A T A C G A T C G T G C A C A G T A T C G G T C A
G C A T A T C G A T G C A G T C A C G T A T C G T C G A T C A G A T C G A T G C C A G T A C G T A C G T

TFAP2C(var.2)/MA0814.1/Jaspar

Match Rank:2
Score:0.83
Offset:-1
Orientation:reverse strand
Alignment:-GCCTGAGGMTGM
NGCCTNAGGCN--
A C G T A T C G G T A C A T G C G C A T T A C G T C G A T A C G A T C G T G C A C A G T A T C G G T C A
G C A T A T C G A T G C A G T C A G C T A T C G T C G A T C A G A T C G A T G C C A G T A C G T A C G T

TFAP2A/MA0003.3/Jaspar

Match Rank:3
Score:0.83
Offset:-1
Orientation:reverse strand
Alignment:-GCCTGAGGMTGM
NGCCTGAGGCN--
A C G T A T C G G T A C A T G C G C A T T A C G T C G A T A C G A T C G T G C A C A G T A T C G G T C A
G C A T A T C G A T G C A G T C A C G T A T C G T C G A T C A G A T C G A T G C C A T G A C G T A C G T

PB0088.1_Tcfap2e_1/Jaspar

Match Rank:4
Score:0.79
Offset:-3
Orientation:reverse strand
Alignment:---GCCTGAGGMTGM
NTNGCCTCAGGCNNN
A C G T A C G T A C G T A T C G G T A C A T G C G C A T T A C G T C G A T A C G A T C G T G C A C A G T A T C G G T C A
G C T A C A G T G A C T A T C G A G T C A G T C A G C T T A G C T C G A T C A G A C T G T A G C C G T A C G T A C G A T

AP-2gamma(AP2)/MCF7-TFAP2C-ChIP-Seq(GSE21234)/Homer

Match Rank:5
Score:0.78
Offset:-3
Orientation:reverse strand
Alignment:---GCCTGAGGMTGM
WTGSCCTSAGGS---
A C G T A C G T A C G T A T C G G T A C A T G C G C A T T A C G T C G A T A C G A T C G T G C A C A G T A T C G G T C A
G C T A G A C T C A T G A T G C A G T C A G T C G A C T T A C G C T G A C T A G A C T G T A G C A C G T A C G T A C G T

AP-2alpha(AP2)/Hela-AP2alpha-ChIP-Seq(GSE31477)/Homer

Match Rank:6
Score:0.74
Offset:-3
Orientation:forward strand
Alignment:---GCCTGAGGMTGM
ATGCCCTGAGGC---
A C G T A C G T A C G T A T C G G T A C A T G C G C A T T A C G T C G A T A C G A T C G T G C A C A G T A T C G G T C A
G C T A C G A T C A T G A T G C A G T C A G T C G A C T T A C G T C G A C T A G A C T G T A G C A C G T A C G T A C G T

PB0190.1_Tcfap2b_2/Jaspar

Match Rank:7
Score:0.72
Offset:-3
Orientation:reverse strand
Alignment:---GCCTGAGGMTGM
ANTGCCTGAGGCAAN
A C G T A C G T A C G T A T C G G T A C A T G C G C A T T A C G T C G A T A C G A T C G T G C A C A G T A T C G G T C A
C G T A C A G T G A C T C A T G G A T C G A T C C A G T T A C G T G C A C A T G C A T G A G T C C G T A G T C A G A C T

PB0087.1_Tcfap2c_1/Jaspar

Match Rank:8
Score:0.71
Offset:-3
Orientation:reverse strand
Alignment:---GCCTGAGGMTGM
NTCGCCTCAGGCAAT
A C G T A C G T A C G T A T C G G T A C A T G C G C A T T A C G T C G A T A C G A T C G T G C A C A G T A T C G G T C A
G C A T C G A T G A T C A T C G G T A C A G T C A G C T T A G C T C G A C T A G A C T G T A G C C T G A C G T A C G A T

PB0085.1_Tcfap2a_1/Jaspar

Match Rank:9
Score:0.68
Offset:-3
Orientation:reverse strand
Alignment:---GCCTGAGGMTGM
NTCCCCTCAGGGANT
A C G T A C G T A C G T A T C G G T A C A T G C G C A T T A C G T C G A T A C G A T C G T G C A C A G T A T C G G T C A
G A C T C G A T G A T C A T G C G T A C A G T C A G C T T A G C T C G A C T A G A C T G T A C G C G T A G C T A G C A T

TFAP2A(var.2)/MA0810.1/Jaspar

Match Rank:10
Score:0.59
Offset:-1
Orientation:reverse strand
Alignment:-GCCTGAGGMTGM
TGCCCNGGGGCA-
A C G T A T C G G T A C A T G C G C A T T A C G T C G A T A C G A T C G T G C A C A G T A T C G G T C A
G A C T T A C G T A G C A G T C A G T C A C T G T C A G T C A G T C A G A T C G A T G C C T G A A C G T