Information for 11-YGATGATK (Motif 16)

A G T C C T A G C G T A C G A T A T C G C G T A A C G T C A G T
Reverse Opposite:
G T C A G T C A A C G T A T G C C G T A C G A T A G T C T C A G
p-value:1e-36
log p-value:-8.442e+01
Information Content per bp:1.752
Number of Target Sequences with motif65.0
Percentage of Target Sequences with motif10.94%
Number of Background Sequences with motif578.7
Percentage of Background Sequences with motif1.36%
Average Position of motif in Targets113.8 +/- 56.9bp
Average Position of motif in Background99.4 +/- 83.7bp
Strand Bias (log2 ratio + to - strand density)-0.6
Multiplicity (# of sites on avg that occur together)1.26
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

PH0017.1_Cux1_2/Jaspar

Match Rank:1
Score:0.71
Offset:-3
Orientation:forward strand
Alignment:---YGATGATK----
TAATGATGATCACTA
 A C G T A C G T A C G T A G T C C T A G C G T A C G A T A T C G C G T A A C G T C A G T A C G T A C G T A C G T A C G T
C G A T T G C A T C G A A G C T C A T G G C T A C G A T C T A G C G T A C A G T G A T C T C G A G T A C C G A T C G T A

MAFG::NFE2L1/MA0089.1/Jaspar

Match Rank:2
Score:0.68
Offset:1
Orientation:forward strand
Alignment:YGATGATK
-CATGAC-
 A G T C C T A G C G T A C G A T A T C G C G T A A C G T C A G T
A C G T T A G C T C G A A C G T C A T G C G T A A G T C A C G T

GATA5/MA0766.1/Jaspar

Match Rank:3
Score:0.67
Offset:0
Orientation:forward strand
Alignment:YGATGATK
AGATAAGA
 A G T C C T A G C G T A C G A T A T C G C G T A A C G T C A G T
G C T A A C T G C T G A A C G T G C T A C T G A T A C G T C G A

GATA3/MA0037.3/Jaspar

Match Rank:4
Score:0.65
Offset:0
Orientation:forward strand
Alignment:YGATGATK
AGATAAGA
 A G T C C T A G C G T A C G A T A T C G C G T A A C G T C A G T
G C T A A C T G C G T A A C G T G C T A C T G A T A C G T C G A

Gata4(Zf)/Heart-Gata4-ChIP-Seq(GSE35151)/Homer

Match Rank:5
Score:0.65
Offset:-2
Orientation:forward strand
Alignment:--YGATGATK
NBWGATAAGR
 A C G T A C G T A G T C C T A G C G T A C G A T A T C G C G T A A C G T C A G T
T A C G A T G C G C T A A C T G C G T A A C G T C G T A C T G A T A C G T C G A

CUX1/MA0754.1/Jaspar

Match Rank:6
Score:0.65
Offset:-4
Orientation:reverse strand
Alignment:----YGATGATK
NTATCGATTA--
 A C G T A C G T A C G T A C G T A G T C C T A G C G T A C G A T A T C G C G T A A C G T C A G T
C A G T A C G T C G T A G C A T A G T C T C A G T C G A G A C T G A C T C T G A A C G T A C G T

Atf3/MA0605.1/Jaspar

Match Rank:7
Score:0.65
Offset:1
Orientation:forward strand
Alignment:YGATGATK-
-GATGACGT
 A G T C C T A G C G T A C G A T A T C G C G T A A C G T C A G T A C G T
A C G T A T C G C T G A A C G T A C T G C G T A A G T C C T A G G A C T

CUX2/MA0755.1/Jaspar

Match Rank:8
Score:0.64
Offset:-4
Orientation:reverse strand
Alignment:----YGATGATK
TTATCGATTA--
 A C G T A C G T A C G T A C G T A G T C C T A G C G T A C G A T A T C G C G T A A C G T C A G T
C G A T C G A T C G T A G C A T G A T C T C A G T C G A G A C T G A C T C G T A A C G T A C G T

PB0022.1_Gata5_1/Jaspar

Match Rank:9
Score:0.64
Offset:-5
Orientation:forward strand
Alignment:-----YGATGATK----
TAAACTGATAAGAAGAT
 A C G T A C G T A C G T A C G T A C G T A G T C C T A G C G T A C G A T A T C G C G T A A C G T C A G T A C G T A C G T A C G T A C G T
G C A T C G T A C G T A C T G A A G T C G C A T A C T G C G T A C G A T G C T A C G T A T A C G T C G A T C G A C A T G C G T A C A G T

RHOXF1/MA0719.1/Jaspar

Match Rank:10
Score:0.63
Offset:-1
Orientation:reverse strand
Alignment:-YGATGATK
NGGATTAN-
 A C G T A G T C C T A G C G T A C G A T A T C G C G T A A C G T C A G T
C A T G C T A G A C T G G T C A A C G T G A C T G C T A C G A T A C G T