Information for 18-TATTTGGACC (Motif 18)

A C G T C G T A A C G T A C G T A C G T A C T G A C T G C G T A A T G C A G T C
Reverse Opposite:
A C T G A T C G A C G T A G T C A G T C C G T A C G T A C G T A A C G T C G T A
p-value:1e-30
log p-value:-7.100e+01
Information Content per bp:1.967
Number of Target Sequences with motif23.0
Percentage of Target Sequences with motif3.87%
Number of Background Sequences with motif32.2
Percentage of Background Sequences with motif0.08%
Average Position of motif in Targets109.5 +/- 52.2bp
Average Position of motif in Background116.2 +/- 41.7bp
Strand Bias (log2 ratio + to - strand density)2.3
Multiplicity (# of sites on avg that occur together)1.04
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

MSX2/MA0708.1/Jaspar

Match Rank:1
Score:0.62
Offset:-1
Orientation:reverse strand
Alignment:-TATTTGGACC
NTAATTGG---
 A C G T A C G T C G T A A C G T A C G T A C G T A C T G A C T G C G T A A T G C A G T C
A G C T C A G T T C G A C G T A A C G T C A G T C T A G A T C G A C G T A C G T A C G T

MF0008.1_MADS_class/Jaspar

Match Rank:2
Score:0.61
Offset:-3
Orientation:forward strand
Alignment:---TATTTGGACC
CCATATATGG---
 A C G T A C G T A C G T A C G T C G T A A C G T A C G T A C G T A C T G A C T G C G T A A T G C A G T C
G A T C A G T C G C T A C G A T C G T A C G A T C G T A G C A T C T A G C A T G A C G T A C G T A C G T

Msx3/MA0709.1/Jaspar

Match Rank:3
Score:0.60
Offset:-1
Orientation:reverse strand
Alignment:-TATTTGGACC
NTAATTGN---
 A C G T A C G T C G T A A C G T A C G T A C G T A C T G A C T G C G T A A T G C A G T C
A G C T G C A T C T G A C G T A A C G T A G C T C T A G A T C G A C G T A C G T A C G T

MSX1/MA0666.1/Jaspar

Match Rank:4
Score:0.60
Offset:-1
Orientation:reverse strand
Alignment:-TATTTGGACC
NTAATTGG---
 A C G T A C G T C G T A A C G T A C G T A C G T A C T G A C T G C G T A A T G C A G T C
A G T C A C G T T G C A G T C A A C G T A C G T C T A G T A C G A C G T A C G T A C G T

Mef2d(MADS)/Retina-Mef2d-ChIP-Seq(GSE61391)/Homer

Match Rank:5
Score:0.59
Offset:-2
Orientation:forward strand
Alignment:--TATTTGGACC
GCTATTTTTAGC
 A C G T A C G T A C G T C G T A A C G T A C G T A C G T A C T G A C T G C G T A A T G C A G T C
C A T G A G T C A G C T C G T A C G A T C G A T G C A T G C A T C G A T C T G A C A T G T G A C

Mef2c(MADS)/GM12878-Mef2c-ChIP-Seq(GSE32465)/Homer

Match Rank:6
Score:0.59
Offset:-2
Orientation:reverse strand
Alignment:--TATTTGGACC
KCTATTTTTRGH
 A C G T A C G T A C G T C G T A A C G T A C G T A C G T A C T G A C T G C G T A A T G C A G T C
C A T G A G T C G A C T C G T A C G A T G C A T G C A T G C A T C G A T C T G A C A T G G T A C

PH0107.1_Msx2/Jaspar

Match Rank:7
Score:0.59
Offset:-5
Orientation:reverse strand
Alignment:-----TATTTGGACC--
ANCGCTAATTGGTCTNN
 A C G T A C G T A C G T A C G T A C G T A C G T C G T A A C G T A C G T A C G T A C T G A C T G C G T A A T G C A G T C A C G T A C G T
T C G A C T A G G T A C C T A G G T A C G A C T C G T A C G T A A C G T C G A T C T A G T A C G G A C T A T G C G A C T A C G T A G T C

Mef2a(MADS)/HL1-Mef2a.biotin-ChIP-Seq(GSE21529)/Homer

Match Rank:8
Score:0.58
Offset:-1
Orientation:reverse strand
Alignment:-TATTTGGACC
CTATTTTTGG-
 A C G T A C G T C G T A A C G T A C G T A C G T A C T G A C T G C G T A A T G C A G T C
A T G C A G C T G T C A C G A T C G A T A G C T G A C T G C A T C T G A C A T G A C G T

ISX/MA0654.1/Jaspar

Match Rank:9
Score:0.58
Offset:-1
Orientation:reverse strand
Alignment:-TATTTGGACC
NTAATTAG---
 A C G T A C G T C G T A A C G T A C G T A C G T A C T G A C T G C G T A A T G C A G T C
A G C T C G A T G T C A C G T A C A G T C A G T C T G A T C A G A C G T A C G T A C G T

CArG(MADS)/PUER-Srf-ChIP-Seq(Sullivan_et_al.)/Homer

Match Rank:10
Score:0.57
Offset:-3
Orientation:forward strand
Alignment:---TATTTGGACC
CCATATATGGNA-
 A C G T A C G T A C G T A C G T C G T A A C G T A C G T A C G T A C T G A C T G C G T A A T G C A G T C
A T G C A G T C G C T A C G A T C G T A G C A T G C T A C G A T C T A G C A T G T G A C G T C A A C G T