Information for 5-TGCAAGTGGATA (Motif 3)

A C G T T A C G G A T C C G T A C G T A A C T G C G A T C A T G T A C G G T C A A C G T C G T A
Reverse Opposite:
A C G T T G C A A C G T A G T C G A T C C G T A G T A C G A C T A C G T C A T G A T G C C G T A
p-value:1e-143
log p-value:-3.293e+02
Information Content per bp:1.928
Number of Target Sequences with motif65.0
Percentage of Target Sequences with motif10.94%
Number of Background Sequences with motif12.0
Percentage of Background Sequences with motif0.03%
Average Position of motif in Targets101.2 +/- 54.5bp
Average Position of motif in Background114.9 +/- 40.2bp
Strand Bias (log2 ratio + to - strand density)2.6
Multiplicity (# of sites on avg that occur together)1.09
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

PH0114.1_Nkx2-5/Jaspar

Match Rank:1
Score:0.70
Offset:-3
Orientation:reverse strand
Alignment:---TGCAAGTGGATA-
AAATTCAAGTGGNTTN
 A C G T A C G T A C G T A C G T T A C G G A T C C G T A C G T A A C T G C G A T C A T G T A C G G T C A A C G T C G T A A C G T
C T G A C T G A C G T A A G C T G C A T A G T C C T G A C G T A A C T G C G A T C T A G A T C G G T A C G A C T G A C T C G T A

PH0111.1_Nkx2-2/Jaspar

Match Rank:2
Score:0.69
Offset:-4
Orientation:reverse strand
Alignment:----TGCAAGTGGATA-
NANTTTCAAGTGGTTAN
 A C G T A C G T A C G T A C G T A C G T T A C G G A T C C G T A C G T A A C T G C G A T C A T G T A C G G T C A A C G T C G T A A C G T
G C T A T G C A G C A T G C A T A G C T G C A T A G T C C T G A C G T A A C T G C G A T C T A G A T C G G A C T A G C T G C T A C G A T

NKX2-3/MA0672.1/Jaspar

Match Rank:3
Score:0.66
Offset:0
Orientation:reverse strand
Alignment:TGCAAGTGGATA
NTCAAGTGGN--
 A C G T T A C G G A T C C G T A C G T A A C T G C G A T C A T G T A C G G T C A A C G T C G T A
A G C T G C A T A G T C C T G A G T C A A C T G C G A T C T A G A T C G A C G T A C G T A C G T

ZNF354C/MA0130.1/Jaspar

Match Rank:4
Score:0.66
Offset:5
Orientation:reverse strand
Alignment:TGCAAGTGGATA
-----GTGGAT-
 A C G T T A C G G A T C C G T A C G T A A C T G C G A T C A T G T A C G G T C A A C G T C G T A
A C G T A C G T A C G T A C G T A C G T A T C G A C G T A C T G A C T G C G T A A C G T A C G T

PH0171.1_Nkx2-1/Jaspar

Match Rank:5
Score:0.66
Offset:-3
Orientation:reverse strand
Alignment:---TGCAAGTGGATA-
AANTTCAAGTGGCTTN
 A C G T A C G T A C G T A C G T T A C G G A T C C G T A C G T A A C T G C G A T C A T G T A C G G T C A A C G T C G T A A C G T
C G T A C G T A C A G T A C G T G C A T A G T C C T G A C G T A A C T G C G A T C T A G A T C G T A G C G A C T A C G T T C G A

NKX2-8/MA0673.1/Jaspar

Match Rank:6
Score:0.65
Offset:0
Orientation:reverse strand
Alignment:TGCAAGTGGATA
NTCAAGTGG---
 A C G T T A C G G A T C C G T A C G T A A C T G C G A T C A T G T A C G G T C A A C G T C G T A
A G C T C G A T A T G C C T G A C T G A C T A G C A G T C T A G A T C G A C G T A C G T A C G T

PB0111.1_Bhlhb2_2/Jaspar

Match Rank:7
Score:0.65
Offset:-6
Orientation:forward strand
Alignment:------TGCAAGTGGATA-----
TGTCATTACACGTGGAAGGCGGT
 A C G T A C G T A C G T A C G T A C G T A C G T A C G T T A C G G A T C C G T A C G T A A C T G C G A T C A T G T A C G G T C A A C G T C G T A A C G T A C G T A C G T A C G T A C G T
A G C T C T A G G A C T A T G C C T A G G A C T C A G T T G C A G T A C C T G A A G T C T C A G G A C T A C T G A C T G G T C A C T G A C T A G A T C G G T A C C T A G C T A G G C A T

PH0115.1_Nkx2-6/Jaspar

Match Rank:8
Score:0.64
Offset:-3
Orientation:reverse strand
Alignment:---TGCAAGTGGATA-
AATNTTAAGTGGNTNN
 A C G T A C G T A C G T A C G T T A C G G A T C C G T A C G T A A C T G C G A T C A T G T A C G G T C A A C G T C G T A A C G T
C T G A C T G A C G A T A C T G G C A T A G C T C T G A C G T A A C T G C G A T C T A G A T C G G T A C G A C T G A C T G C T A

PH0113.1_Nkx2-4/Jaspar

Match Rank:9
Score:0.63
Offset:-3
Orientation:reverse strand
Alignment:---TGCAAGTGGATA-
AATTTCAAGTGGCTTN
 A C G T A C G T A C G T A C G T T A C G G A T C C G T A C G T A A C T G C G A T C A T G T A C G G T C A A C G T C G T A A C G T
C T G A C G T A C G A T A C G T G C A T A G T C C T G A C G T A A C T G C G A T C T A G A T C G A G T C G C A T G A C T C G T A

MYC/MA0147.3/Jaspar

Match Rank:10
Score:0.63
Offset:-1
Orientation:reverse strand
Alignment:-TGCAAGTGGATA
NNGCACGTGGNN-
 A C G T A C G T T A C G G A T C C G T A C G T A A C T G C G A T C A T G T A C G G T C A A C G T C G T A
T A C G T C A G T A C G T A G C T C G A A G T C T C A G G A C T A C T G A T C G A T G C A T G C A C G T