Information for 10-TTGAAACACTCT (Motif 6)

C A G T A C G T T A C G C G T A C T G A C T G A A G T C G T C A A T G C C G A T A T G C A C G T
Reverse Opposite:
C G T A A T C G C G T A A T C G A C G T C T A G A G C T A G C T A C G T A G T C G T C A G C T A
p-value:1e-107
log p-value:-2.485e+02
Information Content per bp:1.926
Number of Target Sequences with motif60.0
Percentage of Target Sequences with motif10.10%
Number of Background Sequences with motif28.4
Percentage of Background Sequences with motif0.07%
Average Position of motif in Targets91.3 +/- 51.0bp
Average Position of motif in Background107.8 +/- 64.6bp
Strand Bias (log2 ratio + to - strand density)3.3
Multiplicity (# of sites on avg that occur together)1.08
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

CEBP:AP1(bZIP)/ThioMac-CEBPb-ChIP-Seq(GSE21512)/Homer

Match Rank:1
Score:0.62
Offset:0
Orientation:reverse strand
Alignment:TTGAAACACTCT
TTGCAACATN--
 C A G T A C G T T A C G C G T A C T G A C T G A A G T C G T C A A T G C C G A T A T G C A C G T
C A G T A C G T C T A G A G T C G T C A C G T A G A T C G C T A A G C T G A T C A C G T A C G T

Bapx1(Homeobox)/VertebralCol-Bapx1-ChIP-Seq(GSE36672)/Homer

Match Rank:2
Score:0.62
Offset:3
Orientation:reverse strand
Alignment:TTGAAACACTCT-
---MRSCACTYAA
 C A G T A C G T T A C G C G T A C T G A C T G A A G T C G T C A A T G C C G A T A T G C A C G T A C G T
A C G T A C G T A C G T G T C A C T G A T A G C A G T C C G T A G T A C G C A T A G T C C T G A T C G A

DMRT3/MA0610.1/Jaspar

Match Rank:3
Score:0.60
Offset:-1
Orientation:reverse strand
Alignment:-TTGAAACACTCT
NTTGATACATT--
 A C G T C A G T A C G T T A C G C G T A C T G A C T G A A G T C G T C A A T G C C G A T A T G C A C G T
C G T A C G A T A C G T A C T G G C T A A C G T C G T A A G T C C G T A C G A T A C G T A C G T A C G T

DMRT1(DM)/Testis-DMRT1-ChIP-Seq(GSE64892)/Homer

Match Rank:4
Score:0.60
Offset:0
Orientation:forward strand
Alignment:TTGAAACACTCT---
TWGHWACAWTGTWDC
 C A G T A C G T T A C G C G T A C T G A C T G A A G T C G T C A A T G C C G A T A T G C A C G T A C G T A C G T A C G T
G C A T C G A T C T A G G C T A G C A T C G T A G A T C G C T A C G A T C G A T C T A G C G A T C G T A C G A T G A T C

Nkx3.1(Homeobox)/LNCaP-Nkx3.1-ChIP-Seq(GSE28264)/Homer

Match Rank:5
Score:0.59
Offset:3
Orientation:forward strand
Alignment:TTGAAACACTCT-
---AAGCACTTAA
 C A G T A C G T T A C G C G T A C T G A C T G A A G T C G T C A A T G C C G A T A T G C A C G T A C G T
A C G T A C G T A C G T T C G A T C G A T A C G G A T C G T C A G T A C C G A T A G C T G T C A T G C A

CHR(?)/Hela-CellCycle-Expression/Homer

Match Rank:6
Score:0.58
Offset:-1
Orientation:reverse strand
Alignment:-TTGAAACACTCT
TTTGAAACCG---
 A C G T C A G T A C G T T A C G C G T A C T G A C T G A A G T C G T C A A T G C C G A T A T G C A C G T
A C G T A C G T A C G T T A C G C G T A C T G A C G T A G T A C A G T C A T C G A C G T A C G T A C G T

Sox5/MA0087.1/Jaspar

Match Rank:7
Score:0.58
Offset:3
Orientation:reverse strand
Alignment:TTGAAACACTCT
---NAACAAT--
 C A G T A C G T T A C G C G T A C T G A C T G A A G T C G T C A A T G C C G A T A T G C A C G T
A C G T A C G T A C G T G C A T C G T A C T G A A G T C C G T A G T C A A C G T A C G T A C G T

DMRT6(DM)/Testis-DMRT6-ChIP-Seq(GSE60440)/Homer

Match Rank:8
Score:0.58
Offset:0
Orientation:forward strand
Alignment:TTGAAACACTCT---
YDGHTACAWTGTADC
 C A G T A C G T T A C G C G T A C T G A C T G A A G T C G T C A A T G C C G A T A T G C A C G T A C G T A C G T A C G T
G A C T C G A T C A T G G C T A G C A T C G T A A G T C G C T A G C A T C G A T T A C G G C A T C G T A C A G T G A T C

NFAT(RHD)/Jurkat-NFATC1-ChIP-Seq(Jolma_et_al.)/Homer

Match Rank:9
Score:0.57
Offset:-2
Orientation:reverse strand
Alignment:--TTGAAACACTCT
AATGGAAAAT----
 A C G T A C G T C A G T A C G T T A C G C G T A C T G A C T G A A G T C G T C A A T G C C G A T A T G C A C G T
T C G A T C G A A G C T A C T G A C T G C G T A C G T A G T C A T G C A G C A T A C G T A C G T A C G T A C G T

Nkx2.5(Homeobox)/HL1-Nkx2.5.biotin-ChIP-Seq(GSE21529)/Homer

Match Rank:10
Score:0.57
Offset:3
Orientation:forward strand
Alignment:TTGAAACACTCT-
---AASCACTCAA
 C A G T A C G T T A C G C G T A C T G A C T G A A G T C G T C A A T G C C G A T A T G C A C G T A C G T
A C G T A C G T A C G T C T G A C T G A T A G C G A T C G C T A G T A C A C G T G A T C T G C A C G T A