Information for 1-CGAGTCCATTCG (Motif 1)

A G T C A T C G C T G A C A T G C G A T G T A C A G T C C G T A A C G T A C G T A G T C A T C G
Reverse Opposite:
A T G C C T A G C G T A C G T A A C G T A C T G A C T G C G T A G T A C G A C T A T G C C T A G
p-value:1e-118
log p-value:-2.721e+02
Information Content per bp:1.906
Number of Target Sequences with motif30.0
Percentage of Target Sequences with motif49.18%
Number of Background Sequences with motif0.0
Percentage of Background Sequences with motif0.00%
Average Position of motif in Targets105.0 +/- 53.0bp
Average Position of motif in Background0.0 +/- 0.0bp
Strand Bias (log2 ratio + to - strand density)-1.9
Multiplicity (# of sites on avg that occur together)2.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

PB0170.1_Sox17_2/Jaspar

Match Rank:1
Score:0.52
Offset:1
Orientation:forward strand
Alignment:CGAGTCCATTCG------
-GACCACATTCATACAAT
 A G T C A T C G C T G A C A T G C G A T G T A C A G T C C G T A A C G T A C G T A G T C A T C G A C G T A C G T A C G T A C G T A C G T A C G T
A C G T T A C G G C T A A G T C G T A C G T C A A G T C G C T A A G C T C G A T T G A C C T G A A G C T T C G A G A T C T C G A C G T A C G A T

PB0134.1_Hnf4a_2/Jaspar

Match Rank:2
Score:0.52
Offset:-4
Orientation:forward strand
Alignment:----CGAGTCCATTCG
GGCAAAAGTCCAATAA
 A C G T A C G T A C G T A C G T A G T C A T C G C T G A C A T G C G A T G T A C A G T C C G T A A C G T A C G T A G T C A T C G
A C G T A C G T G A T C G T A C C G T A C T G A C T G A A C T G A C G T G T A C A G T C C T G A G T C A C G A T G T C A G C A T

Hnf6b(Homeobox)/LNCaP-Hnf6b-ChIP-Seq(GSE106305)/Homer

Match Rank:3
Score:0.52
Offset:2
Orientation:reverse strand
Alignment:CGAGTCCATTCG
--RRTCAATA--
 A G T C A T C G C T G A C A T G C G A T G T A C A G T C C G T A A C G T A C G T A G T C A T C G
A C G T A C G T C T A G C T G A A G C T G T A C C T G A C G T A A C G T C G T A A C G T A C G T

PB0028.1_Hbp1_1/Jaspar

Match Rank:4
Score:0.52
Offset:0
Orientation:reverse strand
Alignment:CGAGTCCATTCG----
NNCATTCATTCATNNN
 A G T C A T C G C T G A C A T G C G A T G T A C A G T C C G T A A C G T A C G T A G T C A T C G A C G T A C G T A C G T A C G T
T C G A G A C T G T A C C G T A A G C T G A C T T G A C C G T A C G A T G C A T A T G C C G T A C G A T G C T A A C T G C G A T

TEAD1/MA0090.2/Jaspar

Match Rank:5
Score:0.52
Offset:4
Orientation:forward strand
Alignment:CGAGTCCATTCG--
----CACATTCCAT
 A G T C A T C G C T G A C A T G C G A T G T A C A G T C C G T A A C G T A C G T A G T C A T C G A C G T A C G T
A C G T A C G T A C G T A C G T G A T C T C G A T G A C G T C A A G C T G C A T G T A C A G T C C G T A G A C T

Isl1(Homeobox)/Neuron-Isl1-ChIP-Seq(GSE31456)/Homer

Match Rank:6
Score:0.52
Offset:4
Orientation:reverse strand
Alignment:CGAGTCCATTCG
----BCMATTAG
 A G T C A T C G C T G A C A T G C G A T G T A C A G T C C G T A A C G T A C G T A G T C A T C G
A C G T A C G T A C G T A C G T A C T G A G T C G T C A G T C A A C G T A G C T C G T A T C A G

TEAD1(TEAD)/HepG2-TEAD1-ChIP-Seq(Encode)/Homer

Match Rank:7
Score:0.51
Offset:3
Orientation:forward strand
Alignment:CGAGTCCATTCG-
---CYRCATTCCA
 A G T C A T C G C T G A C A T G C G A T G T A C A G T C C G T A A C G T A C G T A G T C A T C G A C G T
A C G T A C G T A C G T T G A C A G T C C T G A T G A C C G T A A C G T A C G T A G T C A G T C C G T A

POL004.1_CCAAT-box/Jaspar

Match Rank:8
Score:0.51
Offset:0
Orientation:forward strand
Alignment:CGAGTCCATTCG
ACTAGCCAATCA
 A G T C A T C G C T G A C A T G C G A T G T A C A G T C C G T A A C G T A C G T A G T C A T C G
G T C A A G T C G A C T C T G A C T A G A G T C A G T C C G T A C G T A C G A T T A G C T C G A

Ddit3::Cebpa/MA0019.1/Jaspar

Match Rank:9
Score:0.51
Offset:-1
Orientation:reverse strand
Alignment:-CGAGTCCATTCG
GGGATTGCATNN-
 A C G T A G T C A T C G C T G A C A T G C G A T G T A C A G T C C G T A A C G T A C G T A G T C A T C G
T C A G A T C G A C T G C T G A A C G T A C G T C A T G G T A C C T G A A G C T A G T C A G C T A C G T

PB0033.1_Irf3_1/Jaspar

Match Rank:10
Score:0.50
Offset:-1
Orientation:reverse strand
Alignment:-CGAGTCCATTCG-
CAGTTTCGNTTCTN
 A C G T A G T C A T C G C T G A C A T G C G A T G T A C A G T C C G T A A C G T A C G T A G T C A T C G A C G T
A G T C C T G A A T C G C A G T C G A T A C G T A G T C A T C G C A T G C G A T G C A T G A T C G A C T T A G C