Information for 16-CCATTTCAATTT (Motif 12)

A G T C A G T C C G T A A C G T A C G T A C G T A G T C C G T A C G T A A C G T A C G T A C G T
Reverse Opposite:
C G T A C G T A C G T A A C G T A C G T A C T G C G T A C G T A C G T A A C G T A C T G A C T G
p-value:1e-12
log p-value:-2.845e+01
Information Content per bp:1.530
Number of Target Sequences with motif4.0
Percentage of Target Sequences with motif6.56%
Number of Background Sequences with motif0.6
Percentage of Background Sequences with motif0.00%
Average Position of motif in Targets89.5 +/- 40.3bp
Average Position of motif in Background149.7 +/- 11.4bp
Strand Bias (log2 ratio + to - strand density)0.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

PH0114.1_Nkx2-5/Jaspar

Match Rank:1
Score:0.69
Offset:-4
Orientation:forward strand
Alignment:----CCATTTCAATTT
TAAGCCACTTGAATTT
 A C G T A C G T A C G T A C G T A G T C A G T C C G T A A C G T A C G T A C G T A G T C C G T A C G T A A C G T A C G T A C G T
G A C T C T G A C T G A C A T G T A G C A G T C G C T A G T A C A C G T G A C T T C A G C G T A T C G A G C A T G A C T A G C T

LIN54/MA0619.1/Jaspar

Match Rank:2
Score:0.66
Offset:2
Orientation:forward strand
Alignment:CCATTTCAATTT
--ATTTGAATT-
 A G T C A G T C C G T A A C G T A C G T A C G T A G T C C G T A C G T A A C G T A C G T A C G T
A C G T A C G T C G T A A C G T A C G T A G C T C T A G C G T A C G T A G A C T G A C T A C G T

IRF1(IRF)/PBMC-IRF1-ChIP-Seq(GSE43036)/Homer

Match Rank:3
Score:0.65
Offset:1
Orientation:reverse strand
Alignment:CCATTTCAATTT-
-ACTTTCACTTTC
 A G T C A G T C C G T A A C G T A C G T A C G T A G T C C G T A C G T A A C G T A C G T A C G T A C G T
A C G T C T G A A T G C G A C T C G A T A G C T A G T C C G T A A T G C A C G T A C G T G A C T A G T C

PH0171.1_Nkx2-1/Jaspar

Match Rank:4
Score:0.64
Offset:-4
Orientation:forward strand
Alignment:----CCATTTCAATTT
TAAGCCACTTGAAATT
 A C G T A C G T A C G T A C G T A G T C A G T C C G T A A C G T A C G T A C G T A G T C C G T A C G T A A C G T A C G T A C G T
A G C T T C G A C T G A A T C G T A G C A G T C G C T A G T A C A C G T G A C T T C A G C G T A T G C A G T C A G C A T G C A T

ISRE(IRF)/ThioMac-LPS-Expression(GSE23622)/Homer

Match Rank:5
Score:0.63
Offset:1
Orientation:forward strand
Alignment:CCATTTCAATTT-
-AGTTTCAGTTTC
 A G T C A G T C C G T A A C G T A C G T A C G T A G T C C G T A C G T A A C G T A C G T A C G T A C G T
A C G T C T G A A T C G A G C T A G C T A C G T T A G C C T G A T A C G C G A T A C G T G A C T A G T C

PB0146.1_Mafk_2/Jaspar

Match Rank:6
Score:0.63
Offset:1
Orientation:reverse strand
Alignment:CCATTTCAATTT----
-CCTTGCAATTTTTNN
 A G T C A G T C C G T A A C G T A C G T A C G T A G T C C G T A C G T A A C G T A C G T A C G T A C G T A C G T A C G T A C G T
A C G T A G T C T A G C C A G T A C G T C T A G G T A C C T G A G T C A C G A T C G A T G A C T G A C T A G C T C A G T A G T C

PH0113.1_Nkx2-4/Jaspar

Match Rank:7
Score:0.63
Offset:-4
Orientation:forward strand
Alignment:----CCATTTCAATTT
TAAGCCACTTGAAATT
 A C G T A C G T A C G T A C G T A G T C A G T C C G T A A C G T A C G T A C G T A G T C C G T A C G T A A C G T A C G T A C G T
G C A T C G T A C G T A C T A G T A G C G A T C G C T A G T A C A C G T G A C T T C A G C G T A T G C A G C T A G C A T G A C T

IRF1/MA0050.2/Jaspar

Match Rank:8
Score:0.62
Offset:-3
Orientation:forward strand
Alignment:---CCATTTCAATTT------
TTTTACTTTCACTTTCACTTT
 A C G T A C G T A C G T A G T C A G T C C G T A A C G T A C G T A C G T A G T C C G T A C G T A A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T
G A C T A G C T A G C T A G C T C T G A A T G C C G A T A G C T A G C T A G T C C T G A A T G C G C A T G A C T G A C T A G T C C G T A A G T C G A C T G C A T G A C T

IRF3(IRF)/BMDM-Irf3-ChIP-Seq(GSE67343)/Homer

Match Rank:9
Score:0.62
Offset:1
Orientation:forward strand
Alignment:CCATTTCAATTT-
-AGTTTCAKTTTC
 A G T C A G T C C G T A A C G T A C G T A C G T A G T C C G T A C G T A A C G T A C G T A C G T A C G T
A C G T C T G A T A C G G C A T A G C T A G C T A G T C T C G A A C T G C A G T A G C T A G C T G A T C

IRF2(IRF)/Erythroblas-IRF2-ChIP-Seq(GSE36985)/Homer

Match Rank:10
Score:0.62
Offset:1
Orientation:reverse strand
Alignment:CCATTTCAATTT-
-RSTTTCRSTTTC
 A G T C A G T C C G T A A C G T A C G T A C G T A G T C C G T A C G T A A C G T A C G T A C G T A C G T
A C G T T C G A A T G C A C G T A C G T A G C T A G T C C T G A A T G C G C A T G A C T A G C T G A T C