Information for 20-GTCCATGGAT (Motif 16)

A C T G A C G T A G T C A G T C C T G A A C G T A C T G A C T G C G T A A C G T
Reverse Opposite:
C G T A A C G T A G T C A G T C C G T A A G C T A C T G A C T G C G T A A G T C
p-value:1e-7
log p-value:-1.763e+01
Information Content per bp:1.957
Number of Target Sequences with motif4.0
Percentage of Target Sequences with motif6.56%
Number of Background Sequences with motif15.5
Percentage of Background Sequences with motif0.05%
Average Position of motif in Targets119.5 +/- 37.2bp
Average Position of motif in Background77.6 +/- 64.1bp
Strand Bias (log2 ratio + to - strand density)-1.6
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

ZNF354C/MA0130.1/Jaspar

Match Rank:1
Score:0.61
Offset:4
Orientation:reverse strand
Alignment:GTCCATGGAT
----GTGGAT
 A C T G A C G T A G T C A G T C C T G A A C G T A C T G A C T G C G T A A C G T
A C G T A C G T A C G T A C G T A T C G A C G T A C T G A C T G C G T A A C G T

Nr5a2(NR)/mES-Nr5a2-ChIP-Seq(GSE19019)/Homer

Match Rank:2
Score:0.59
Offset:-1
Orientation:reverse strand
Alignment:-GTCCATGGAT
TGACCTTGAN-
 A C G T A C T G A C G T A G T C A G T C C T G A A C G T A C T G A C T G C G T A A C G T
G C A T C T A G C T G A T G A C G A T C A G C T C A G T A T C G C T G A T G C A A C G T

RHOXF1/MA0719.1/Jaspar

Match Rank:3
Score:0.57
Offset:5
Orientation:reverse strand
Alignment:GTCCATGGAT---
-----NGGATTAN
 A C T G A C G T A G T C A G T C C T G A A C G T A C T G A C T G C G T A A C G T A C G T A C G T A C G T
A C G T A C G T A C G T A C G T A C G T C A T G C T A G A C T G G T C A A C G T G A C T G C T A C G A T

Nr5a2(NR)/Pancreas-LRH1-ChIP-Seq(GSE34295)/Homer

Match Rank:4
Score:0.56
Offset:-1
Orientation:reverse strand
Alignment:-GTCCATGGAT
TGACCTTGAV-
 A C G T A C T G A C G T A G T C A G T C C T G A A C G T A C T G A C T G C G T A A C G T
G C A T C T A G C T G A G A T C G T A C G A C T G A C T A T C G C T G A T G C A A C G T

PB0084.1_Tcf7l2_1/Jaspar

Match Rank:5
Score:0.56
Offset:-2
Orientation:forward strand
Alignment:--GTCCATGGAT-----
ATTTCCTTTGATCTATA
 A C G T A C G T A C T G A C G T A G T C A G T C C T G A A C G T A C T G A C T G C G T A A C G T A C G T A C G T A C G T A C G T A C G T
C G T A C G A T C A G T A G C T A G T C A G T C G A C T G A C T C G A T A C T G C G T A C G A T T A G C G C A T C G T A C A G T T G C A

PB0040.1_Lef1_1/Jaspar

Match Rank:6
Score:0.56
Offset:-2
Orientation:forward strand
Alignment:--GTCCATGGAT-----
AATCCCTTTGATCTATC
 A C G T A C G T A C T G A C G T A G T C A G T C C T G A A C G T A C T G A C T G C G T A A C G T A C G T A C G T A C G T A C G T A C G T
C T A G C T G A C G A T A G T C A G T C A G T C G A C T G A C T C G A T A T C G C G T A C G A T T A G C G C A T C G T A C G A T T G A C

SF1(NR)/H295R-Nr5a1-ChIP-Seq(GSE44220)/Homer

Match Rank:7
Score:0.56
Offset:-3
Orientation:reverse strand
Alignment:---GTCCATGGAT
BNTGDCCTTG---
 A C G T A C G T A C G T A C T G A C G T A G T C A G T C C T G A A C G T A C T G A C T G C G T A A C G T
A T G C C A T G A C G T C T A G C T G A T G A C T G A C G A C T G C A T A C T G A C G T A C G T A C G T

Cux2(Homeobox)/Liver-Cux2-ChIP-Seq(GSE35985)/Homer

Match Rank:8
Score:0.56
Offset:4
Orientation:reverse strand
Alignment:GTCCATGGAT----
----ATTGATTYND
 A C T G A C G T A G T C A G T C C T G A A C G T A C T G A C T G C G T A A C G T A C G T A C G T A C G T A C G T
A C G T A C G T A C G T A C G T C G T A A C G T A G C T A T C G G T C A A G C T G A C T A G C T T G A C C G A T

CUX1(Homeobox)/K562-CUX1-ChIP-Seq(GSE92882)/Homer

Match Rank:9
Score:0.55
Offset:1
Orientation:reverse strand
Alignment:GTCCATGGAT-
-NTNATCGATA
 A C T G A C G T A G T C A G T C C T G A A C G T A C T G A C T G C G T A A C G T A C G T
A C G T G C A T A G C T C A G T T C G A A G C T G A T C C T A G T C G A A C G T T G C A

PB0028.1_Hbp1_1/Jaspar

Match Rank:10
Score:0.55
Offset:-3
Orientation:forward strand
Alignment:---GTCCATGGAT---
ACTATGAATGAATGAT
 A C G T A C G T A C G T A C T G A C G T A G T C A G T C C T G A A C G T A C T G A C T G C G T A A C G T A C G T A C G T A C G T
G C T A G T A C C G A T G C T A G C A T T A C G C G T A C G T A C G A T A C T G C T G A T C G A G A C T C A T G C T G A A G C T