Information for 20-GTCTGTCTGTST (Motif 20)

A T C G G A C T A T G C A C G T A T C G G A C T A T G C A C G T A T C G A G C T A T G C A G C T
Reverse Opposite:
C T G A T A C G C T G A T A G C C G T A T A C G C G T A T A G C C G T A T A C G C T G A T A G C
p-value:1e-6
log p-value:-1.590e+01
Information Content per bp:1.685
Number of Target Sequences with motif3.0
Percentage of Target Sequences with motif4.92%
Number of Background Sequences with motif5.7
Percentage of Background Sequences with motif0.02%
Average Position of motif in Targets39.7 +/- 26.1bp
Average Position of motif in Background76.9 +/- 31.8bp
Strand Bias (log2 ratio + to - strand density)1.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

PB0166.1_Sox12_2/Jaspar

Match Rank:1
Score:0.61
Offset:-4
Orientation:reverse strand
Alignment:----GTCTGTCTGTST
ANTCCTTTGTCTNNNN
 A C G T A C G T A C G T A C G T A T C G G A C T A T G C A C G T A T C G G A C T A T G C A C G T A T C G A G C T A T G C A G C T
C G T A G C A T A C G T A G T C A T G C C G A T A G C T C G A T T C A G A C G T T A G C G A C T T C A G G C A T A C G T A C G T

ZNF768(Zf)/Rajj-ZNF768-ChIP-Seq(GSE111879)/Homer

Match Rank:2
Score:0.60
Offset:0
Orientation:reverse strand
Alignment:GTCTGTCTGTST
VCCTCTCTGDDY
 A T C G G A C T A T G C A C G T A T C G G A C T A T G C A C G T A T C G A G C T A T G C A G C T
T G A C T A G C G T A C G C A T A G T C A C G T A T G C C G A T T A C G C G A T C A G T A G T C

ISRE(IRF)/ThioMac-LPS-Expression(GSE23622)/Homer

Match Rank:3
Score:0.55
Offset:-1
Orientation:forward strand
Alignment:-GTCTGTCTGTST
AGTTTCAGTTTC-
 A C G T A T C G G A C T A T G C A C G T A T C G G A C T A T G C A C G T A T C G A G C T A T G C A G C T
C T G A A T C G A G C T A G C T A C G T T A G C C T G A T A C G C G A T A C G T G A C T A G T C A C G T

Smad4(MAD)/ESC-SMAD4-ChIP-Seq(GSE29422)/Homer

Match Rank:4
Score:0.55
Offset:0
Orientation:forward strand
Alignment:GTCTGTCTGTST
VBSYGTCTGG--
 A T C G G A C T A T G C A C G T A T C G G A C T A T G C A C G T A T C G A G C T A T G C A G C T
T A C G A T C G T A G C G A T C A C T G A C G T A G T C A C G T C T A G A T C G A C G T A C G T

Smad2(MAD)/ES-SMAD2-ChIP-Seq(GSE29422)/Homer

Match Rank:5
Score:0.55
Offset:2
Orientation:forward strand
Alignment:GTCTGTCTGTST
--CTGTCTGG--
 A T C G G A C T A T G C A C G T A T C G G A C T A T G C A C G T A T C G A G C T A T G C A G C T
A C G T A C G T A T G C G A C T A C T G C A G T G A T C A C G T T A C G T A C G A C G T A C G T

MF0005.1_Forkhead_class/Jaspar

Match Rank:6
Score:0.54
Offset:3
Orientation:forward strand
Alignment:GTCTGTCTGTST
---TGTTTATTT
 A T C G G A C T A T G C A C G T A T C G G A C T A T G C A C G T A T C G A G C T A T G C A G C T
A C G T A C G T A C G T G C A T C T A G A G C T G A C T C A G T C T G A A G C T C A G T A G C T

Foxd3/MA0041.1/Jaspar

Match Rank:7
Score:0.54
Offset:0
Orientation:forward strand
Alignment:GTCTGTCTGTST
GAATGTTTGTTT
 A T C G G A C T A T G C A C G T A T C G G A C T A T G C A C G T A T C G A G C T A T G C A G C T
C T A G G C T A G C T A G A C T C T A G A C G T C G A T C A G T C T A G G A C T A C G T A G C T

PB0060.1_Smad3_1/Jaspar

Match Rank:8
Score:0.53
Offset:-2
Orientation:reverse strand
Alignment:--GTCTGTCTGTST---
NNTNNTGTCTGGNNTNG
 A C G T A C G T A T C G G A C T A T G C A C G T A T C G G A C T A T G C A C G T A T C G A G C T A T G C A G C T A C G T A C G T A C G T
C A G T A T C G C G A T T C A G T G C A G A C T A C T G C A G T A G T C A C G T T C A G T C A G G C T A G C A T C G A T G A C T C A T G

IRF1(IRF)/PBMC-IRF1-ChIP-Seq(GSE43036)/Homer

Match Rank:9
Score:0.53
Offset:-1
Orientation:reverse strand
Alignment:-GTCTGTCTGTST
ACTTTCACTTTC-
 A C G T A T C G G A C T A T G C A C G T A T C G G A C T A T G C A C G T A T C G A G C T A T G C A G C T
C T G A A T G C G A C T C G A T A G C T A G T C C G T A A T G C A C G T A C G T G A C T A G T C A C G T

SMAD2::SMAD3::SMAD4/MA0513.1/Jaspar

Match Rank:10
Score:0.53
Offset:2
Orientation:forward strand
Alignment:GTCTGTCTGTST---
--CTGTCTGTCACCT
 A T C G G A C T A T G C A C G T A T C G G A C T A T G C A C G T A T C G A G C T A T G C A G C T A C G T A C G T A C G T
A C G T A C G T T A G C G C A T T C A G A C G T A G T C A C G T T A C G C A G T A T G C G C T A T A G C G A T C G A C T