Information for 22-GAAACACTCT (Motif 21)

A C T G C G T A C G T A C G T A A G T C C G T A A G T C A C G T A G T C A C G T
Reverse Opposite:
C G T A A C T G C G T A A C T G C G A T A C T G A C G T A C G T A C G T A G T C
p-value:1e-6
log p-value:-1.563e+01
Information Content per bp:1.962
Number of Target Sequences with motif5.0
Percentage of Target Sequences with motif8.20%
Number of Background Sequences with motif65.9
Percentage of Background Sequences with motif0.20%
Average Position of motif in Targets55.4 +/- 15.6bp
Average Position of motif in Background97.0 +/- 110.5bp
Strand Bias (log2 ratio + to - strand density)0.6
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

Bapx1(Homeobox)/VertebralCol-Bapx1-ChIP-Seq(GSE36672)/Homer

Match Rank:1
Score:0.63
Offset:1
Orientation:reverse strand
Alignment:GAAACACTCT-
-MRSCACTYAA
 A C T G C G T A C G T A C G T A A G T C C G T A A G T C A C G T A G T C A C G T A C G T
A C G T G T C A C T G A T A G C A G T C C G T A G T A C G C A T A G T C C T G A T C G A

Nkx2.5(Homeobox)/HL1-Nkx2.5.biotin-ChIP-Seq(GSE21529)/Homer

Match Rank:2
Score:0.60
Offset:1
Orientation:forward strand
Alignment:GAAACACTCT-
-AASCACTCAA
 A C T G C G T A C G T A C G T A A G T C C G T A A G T C A C G T A G T C A C G T A C G T
A C G T C T G A C T G A T A G C G A T C G C T A G T A C A C G T G A T C T G C A C G T A

Nkx3.1(Homeobox)/LNCaP-Nkx3.1-ChIP-Seq(GSE28264)/Homer

Match Rank:3
Score:0.60
Offset:1
Orientation:forward strand
Alignment:GAAACACTCT-
-AAGCACTTAA
 A C T G C G T A C G T A C G T A A G T C C G T A A G T C A C G T A G T C A C G T A C G T
A C G T T C G A T C G A T A C G G A T C G T C A G T A C C G A T A G C T G T C A T G C A

Sox5/MA0087.1/Jaspar

Match Rank:4
Score:0.60
Offset:1
Orientation:reverse strand
Alignment:GAAACACTCT
-NAACAAT--
 A C T G C G T A C G T A C G T A A G T C C G T A A G T C A C G T A G T C A C G T
A C G T G C A T C G T A C T G A A G T C C G T A G T C A A C G T A C G T A C G T

Nkx2-5(var.2)/MA0503.1/Jaspar

Match Rank:5
Score:0.60
Offset:1
Orientation:forward strand
Alignment:GAAACACTCT--
-AGCCACTCAAG
 A C T G C G T A C G T A C G T A A G T C C G T A A G T C A C G T A G T C A C G T A C G T A C G T
A C G T C T G A C T A G T A G C A G T C G C T A A G T C A C G T A G T C G T C A C T G A T A C G

KLF4/MA0039.3/Jaspar

Match Rank:6
Score:0.59
Offset:1
Orientation:forward strand
Alignment:GAAACACTCT--
-CCACACCCTGC
 A C T G C G T A C G T A C G T A A G T C C G T A A G T C A C G T A G T C A C G T A C G T A C G T
A C G T T G A C T G A C T C G A G T A C C T G A A G T C T G A C G A T C G C A T A T C G G A T C

IRF4(IRF)/GM12878-IRF4-ChIP-Seq(GSE32465)/Homer

Match Rank:7
Score:0.59
Offset:-3
Orientation:forward strand
Alignment:---GAAACACTCT
ACTGAAACCA---
 A C G T A C G T A C G T A C T G C G T A C G T A C G T A A G T C C G T A A G T C A C G T A G T C A C G T
G C T A T A G C A G C T A T C G G T C A C G T A G C T A A T G C G A T C C T G A A C G T A C G T A C G T

DMRT1(DM)/Testis-DMRT1-ChIP-Seq(GSE64892)/Homer

Match Rank:8
Score:0.58
Offset:-2
Orientation:forward strand
Alignment:--GAAACACTCT---
TWGHWACAWTGTWDC
 A C G T A C G T A C T G C G T A C G T A C G T A A G T C C G T A A G T C A C G T A G T C A C G T A C G T A C G T A C G T
G C A T C G A T C T A G G C T A G C A T C G T A G A T C G C T A C G A T C G A T C T A G C G A T C G T A C G A T G A T C

DMRT6(DM)/Testis-DMRT6-ChIP-Seq(GSE60440)/Homer

Match Rank:9
Score:0.58
Offset:0
Orientation:reverse strand
Alignment:GAAACACTCT-----
GHTACAWTGTADCHR
 A C T G C G T A C G T A C G T A A G T C C G T A A G T C A C G T A G T C A C G T A C G T A C G T A C G T A C G T A C G T
C T A G G T C A G C A T C G T A A T G C G C T A C G T A C G A T T C A G G C A T C G T A C G A T G T A C G C T A C T G A

RELA/MA0107.1/Jaspar

Match Rank:10
Score:0.56
Offset:-1
Orientation:reverse strand
Alignment:-GAAACACTCT
GGAAATTCCC-
 A C G T A C T G C G T A C G T A C G T A A G T C C G T A A G T C A C G T A G T C A C G T
A C T G A C T G C T G A C G T A C G T A A G C T A G C T A G T C G T A C T A G C A C G T