Information for 15-TTGGAAAC (Motif 23)

A C G T A C G T A C T G A C T G C G T A C G T A C G T A A G T C
Reverse Opposite:
A C T G A C G T C G A T A C G T A G T C A G T C C G T A C G T A
p-value:1e-4
log p-value:-1.040e+01
Information Content per bp:1.963
Number of Target Sequences with motif7.0
Percentage of Target Sequences with motif11.48%
Number of Background Sequences with motif480.6
Percentage of Background Sequences with motif1.46%
Average Position of motif in Targets94.1 +/- 56.1bp
Average Position of motif in Background100.5 +/- 91.5bp
Strand Bias (log2 ratio + to - strand density)1.6
Multiplicity (# of sites on avg that occur together)1.14
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

NFATC1/MA0624.1/Jaspar

Match Rank:1
Score:0.77
Offset:-1
Orientation:reverse strand
Alignment:-TTGGAAAC-
NNTGGAAANN
 A C G T A C G T A C G T A C T G A C T G C G T A C G T A C G T A A G T C A C G T
C G T A C T G A G A C T C T A G A C T G C T G A C T G A G C T A C G T A G C A T

NFATC2/MA0152.1/Jaspar

Match Rank:2
Score:0.76
Offset:1
Orientation:reverse strand
Alignment:TTGGAAAC
-TGGAAAA
 A C G T A C G T A C T G A C T G C G T A C G T A C G T A A G T C
A C G T C G A T A C T G A C T G C G T A C G T A T C G A G C T A

NFAT(RHD)/Jurkat-NFATC1-ChIP-Seq(Jolma_et_al.)/Homer

Match Rank:3
Score:0.76
Offset:-1
Orientation:reverse strand
Alignment:-TTGGAAAC-
AATGGAAAAT
 A C G T A C G T A C G T A C T G A C T G C G T A C G T A C G T A A G T C A C G T
T C G A T C G A A G C T A C T G A C T G C G T A C G T A G T C A T G C A G C A T

NFATC3/MA0625.1/Jaspar

Match Rank:4
Score:0.75
Offset:-1
Orientation:reverse strand
Alignment:-TTGGAAAC-
AATGGAAAAT
 A C G T A C G T A C G T A C T G A C T G C G T A C G T A C G T A A G T C A C G T
C G T A C T G A G A C T T A C G C A T G T C G A C G T A G C T A C T G A G C A T

NFAT5/MA0606.1/Jaspar

Match Rank:5
Score:0.74
Offset:-1
Orientation:reverse strand
Alignment:-TTGGAAAC-
NATGGAAAAN
 A C G T A C G T A C G T A C T G A C T G C G T A C G T A C G T A A G T C A C G T
G C T A C T G A C G A T T C A G C T A G C G T A C G T A C G T A C G T A A C G T

PB0160.1_Rfxdc2_2/Jaspar

Match Rank:6
Score:0.73
Offset:-4
Orientation:forward strand
Alignment:----TTGGAAAC-----
CTACTTGGATACGGAAT
 A C G T A C G T A C G T A C G T A C G T A C G T A C T G A C T G C G T A C G T A C G T A A G T C A C G T A C G T A C G T A C G T A C G T
A T G C A C G T T C G A A T G C C A G T G A C T T C A G A C T G C G T A A C G T C G T A G A T C T A C G T A C G C G T A C G T A G C A T

CHR(?)/Hela-CellCycle-Expression/Homer

Match Rank:7
Score:0.72
Offset:0
Orientation:reverse strand
Alignment:TTGGAAAC--
TTTGAAACCG
 A C G T A C G T A C T G A C T G C G T A C G T A C G T A A G T C A C G T A C G T
A C G T A C G T A C G T T A C G C G T A C T G A C G T A G T A C A G T C A T C G

PB0158.1_Rfx3_2/Jaspar

Match Rank:8
Score:0.69
Offset:-8
Orientation:forward strand
Alignment:--------TTGGAAAC-------
ACTGACCCTTGGTTACCACAAAG
 A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C T G A C T G C G T A C G T A C G T A A G T C A C G T A C G T A C G T A C G T A C G T A C G T A C G T
T G C A A G T C A C G T A T C G G C T A A T G C T A C G A T G C G C A T C G A T T C A G A C T G C G A T C A G T C G T A G A T C T G A C T C G A T G A C T C G A T C G A C G T A A T C G

RBPJ/MA1116.1/Jaspar

Match Rank:9
Score:0.66
Offset:-2
Orientation:forward strand
Alignment:--TTGGAAAC
CCTGGGAAAG
 A C G T A C G T A C G T A C G T A C T G A C T G C G T A C G T A C G T A A G T C
A G T C T A G C A G C T T C A G A C T G A C T G C G T A G T C A T G C A T A C G

NFIA/MA0670.1/Jaspar

Match Rank:10
Score:0.66
Offset:-2
Orientation:reverse strand
Alignment:--TTGGAAAC
NNTTGGCANN
 A C G T A C G T A C G T A C G T A C T G A C T G C G T A C G T A C G T A A G T C
G C T A A G T C A C G T A C G T A C T G A C T G A G T C C G T A G T A C A G T C