Information for 12-CTTCSYMTMAAA (Motif 7)

A G T C A C G T A C G T A G T C T A G C A G C T G T C A A C G T G T C A C G T A C G T A C G T A
Reverse Opposite:
A C G T A C G T A C G T A C G T G T C A A C G T C T G A A T C G A C T G C G T A C G T A A C T G
p-value:1e-14
log p-value:-3.350e+01
Information Content per bp:1.864
Number of Target Sequences with motif10.0
Percentage of Target Sequences with motif16.39%
Number of Background Sequences with motif94.6
Percentage of Background Sequences with motif0.29%
Average Position of motif in Targets126.1 +/- 51.1bp
Average Position of motif in Background97.2 +/- 87.3bp
Strand Bias (log2 ratio + to - strand density)1.2
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

Hoxd13(Homeobox)/ChickenMSG-Hoxd13.Flag-ChIP-Seq(GSE86088)/Homer

Match Rank:1
Score:0.67
Offset:2
Orientation:forward strand
Alignment:CTTCSYMTMAAA
--NCYAATAAAA
 A G T C A C G T A C G T A G T C T A G C A G C T G T C A A C G T G T C A C G T A C G T A C G T A
A C G T A C G T C T A G T A G C A G T C G T C A C T G A A C G T C G T A C G T A C G T A G C T A

PH0078.1_Hoxd13/Jaspar

Match Rank:2
Score:0.66
Offset:0
Orientation:forward strand
Alignment:CTTCSYMTMAAA----
CTACCAATAAAATTCT
 A G T C A C G T A C G T A G T C T A G C A G C T G T C A A C G T G T C A C G T A C G T A C G T A A C G T A C G T A C G T A C G T
G T A C C G A T G C T A A G T C G A T C G C T A C G T A A G C T C G T A C G T A C G T A G C T A G A C T G A C T G T A C G A C T

HOXB13(Homeobox)/ProstateTumor-HOXB13-ChIP-Seq(GSE56288)/Homer

Match Rank:3
Score:0.66
Offset:2
Orientation:reverse strand
Alignment:CTTCSYMTMAAA
--CCYMATAAAA
 A G T C A C G T A C G T A G T C T A G C A G C T G T C A A C G T G T C A C G T A C G T A C G T A
A C G T A C G T T G A C A T G C A G T C G T C A C T G A A C G T C G T A C G T A C G T A G C T A

HOXB13/MA0901.1/Jaspar

Match Rank:4
Score:0.66
Offset:3
Orientation:forward strand
Alignment:CTTCSYMTMAAA-
---CCAATAAAAC
 A G T C A C G T A C G T A G T C T A G C A G C T G T C A A C G T G T C A C G T A C G T A C G T A A C G T
A C G T A C G T A C G T T A G C G A T C G T C A C G T A A G C T C G T A C G T A G T C A G T C A G T A C

Hoxa13(Homeobox)/ChickenMSG-Hoxa13.Flag-ChIP-Seq(GSE86088)/Homer

Match Rank:5
Score:0.66
Offset:3
Orientation:forward strand
Alignment:CTTCSYMTMAAA-
---CYHATAAAAN
 A G T C A C G T A C G T A G T C T A G C A G C T G T C A A C G T G T C A C G T A C G T A C G T A A C G T
A C G T A C G T A C G T T A G C G A T C G T A C C T G A G C A T C T G A C G T A T G C A C G T A G A T C

HOXD13/MA0909.1/Jaspar

Match Rank:6
Score:0.65
Offset:3
Orientation:forward strand
Alignment:CTTCSYMTMAAA-
---CCAATAAAAA
 A G T C A C G T A C G T A G T C T A G C A G C T G T C A A C G T G T C A C G T A C G T A C G T A A C G T
A C G T A C G T A C G T A T G C G A T C G T C A C G T A A G C T C G T A G C T A G T C A G T C A G T C A

POL008.1_DCE_S_I/Jaspar

Match Rank:7
Score:0.65
Offset:-1
Orientation:forward strand
Alignment:-CTTCSYMTMAAA
GCTTCC-------
 A C G T A G T C A C G T A C G T A G T C T A G C A G C T G T C A A C G T G T C A C G T A C G T A C G T A
A C T G A T G C A G C T A C G T A T G C A T G C A C G T A C G T A C G T A C G T A C G T A C G T A C G T

Stat4/MA0518.1/Jaspar

Match Rank:8
Score:0.64
Offset:-3
Orientation:reverse strand
Alignment:---CTTCSYMTMAAA
NNNTTTCCTGGAAA-
 A C G T A C G T A C G T A G T C A C G T A C G T A G T C T A G C A G C T G T C A A C G T G T C A C G T A C G T A C G T A
A G T C A T G C T C G A A G C T A C G T A C G T A G T C G A T C G A C T C T A G A C T G G T C A C G T A T C G A A C G T

HOXA13/MA0650.1/Jaspar

Match Rank:9
Score:0.63
Offset:3
Orientation:forward strand
Alignment:CTTCSYMTMAAA-
---CCAATAAAAA
 A G T C A C G T A C G T A G T C T A G C A G C T G T C A A C G T G T C A C G T A C G T A C G T A A C G T
A C G T A C G T A C G T T A G C A G T C G T C A C G T A A C G T G C T A C G T A G T C A T G C A G T C A

ZNF410/MA0752.1/Jaspar

Match Rank:10
Score:0.61
Offset:-2
Orientation:forward strand
Alignment:--CTTCSYMTMAAA---
TCCATCCCATAATACTC
 A C G T A C G T A G T C A C G T A C G T A G T C T A G C A G C T G T C A A C G T G T C A C G T A C G T A C G T A A C G T A C G T A C G T
A C G T T G A C G A T C G C T A C A G T G T A C G T A C A T G C G T C A A G C T G T C A T C G A G A C T C T G A G T A C A G C T G T A C