Information for 15-TCTTCGTATAAA (Motif 10)

C A G T G A T C G C A T C A G T G A T C C T A G G A C T C T G A C A G T G T C A C T G A C G T A
Reverse Opposite:
G C A T G A C T C A G T G T C A G A C T C T G A G A T C C T A G G T C A C G T A C T A G G C T A
p-value:1e-18
log p-value:-4.173e+01
Information Content per bp:1.641
Number of Target Sequences with motif38.0
Percentage of Target Sequences with motif12.84%
Number of Background Sequences with motif958.5
Percentage of Background Sequences with motif2.08%
Average Position of motif in Targets99.0 +/- 56.5bp
Average Position of motif in Background95.4 +/- 61.2bp
Strand Bias (log2 ratio + to - strand density)1.2
Multiplicity (# of sites on avg that occur together)1.18
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

POL012.1_TATA-Box/Jaspar

Match Rank:1
Score:0.61
Offset:5
Orientation:forward strand
Alignment:TCTTCGTATAAA--------
-----GTATAAAAGGCGGGG
 C A G T G A T C G C A T C A G T G A T C C T A G G A C T C T G A C A G T G T C A C T G A C G T A A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T
A C G T A C G T A C G T A C G T A C G T T A C G A G C T C G T A G A C T C G T A C G T A C T G A C G T A T C A G T A C G T A G C T A C G T A C G A T C G T A C G

TBP/MA0108.2/Jaspar

Match Rank:2
Score:0.61
Offset:5
Orientation:forward strand
Alignment:TCTTCGTATAAA--------
-----GTATAAAAGGCGGGG
 C A G T G A T C G C A T C A G T G A T C C T A G G A C T C T G A C A G T G T C A C T G A C G T A A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T
A C G T A C G T A C G T A C G T A C G T T A C G A G C T C G T A G A C T C G T A C G T A C T G A C G T A T C A G T A C G T A G C T A C G T A C G A T C G T A C G

PB0080.1_Tbp_1/Jaspar

Match Rank:3
Score:0.60
Offset:0
Orientation:forward strand
Alignment:TCTTCGTATAAA----
TCTTTATATATAAATA
 C A G T G A T C G C A T C A G T G A T C C T A G G A C T C T G A C A G T G T C A C T G A C G T A A C G T A C G T A C G T A C G T
A G C T A G T C G C A T C G A T G C A T C G T A G C A T C G T A C G A T C G T A C G A T C G T A G C T A G T C A C A G T T C G A

FOXC1/MA0032.2/Jaspar

Match Rank:4
Score:0.59
Offset:-1
Orientation:reverse strand
Alignment:-TCTTCGTATAAA
ATATTTACATA--
 A C G T C A G T G A T C G C A T C A G T G A T C C T A G G A C T C T G A C A G T G T C A C T G A C G T A
C G T A G A C T T C G A G A C T C A G T C A G T C G T A A G T C G C T A G A C T C G T A A C G T A C G T

POU5F1B/MA0792.1/Jaspar

Match Rank:5
Score:0.58
Offset:1
Orientation:reverse strand
Alignment:TCTTCGTATAAA
-ATTTGCATA--
 C A G T G A T C G C A T C A G T G A T C C T A G G A C T C T G A C A G T G T C A C T G A C G T A
A C G T G C T A G C A T G C A T G C A T T C A G G T A C T C G A G C A T C T G A A C G T A C G T

SOX10/MA0442.2/Jaspar

Match Rank:6
Score:0.58
Offset:-1
Orientation:reverse strand
Alignment:-TCTTCGTATAAA
NNCTTTGTTNN--
 A C G T C A G T G A T C G C A T C A G T G A T C C T A G G A C T C T G A C A G T G T C A C T G A C G T A
A C G T A G C T T G A C C G A T C G A T C G A T T C A G C G A T A C G T G A C T G A C T A C G T A C G T

POU5F1/MA1115.1/Jaspar

Match Rank:7
Score:0.57
Offset:0
Orientation:reverse strand
Alignment:TCTTCGTATAAA
NATTTGCATNN-
 C A G T G A T C G C A T C A G T G A T C C T A G G A C T C T G A C A G T G T C A C T G A C G T A
G T C A C G T A C G A T G A C T C G A T T C A G G A T C C T G A A G C T C G T A G C A T A C G T

Oct4(POU,Homeobox)/mES-Oct4-ChIP-Seq(GSE11431)/Homer

Match Rank:8
Score:0.57
Offset:1
Orientation:forward strand
Alignment:TCTTCGTATAAA
-ATTTGCATAA-
 C A G T G A T C G C A T C A G T G A T C C T A G G A C T C T G A C A G T G T C A C T G A C G T A
A C G T C G T A A C G T A G C T C G A T C T A G G T A C C G T A A G C T C G T A G C T A A C G T

POU2F1/MA0785.1/Jaspar

Match Rank:9
Score:0.57
Offset:0
Orientation:reverse strand
Alignment:TCTTCGTATAAA
AATTTGCATANT
 C A G T G A T C G C A T C A G T G A T C C T A G G A C T C T G A C A G T G T C A C T G A C G T A
G T C A G C T A G C A T G A C T G C A T T C A G G T A C T C G A G C A T C T G A G C A T C G A T

FOXB1/MA0845.1/Jaspar

Match Rank:10
Score:0.57
Offset:-1
Orientation:reverse strand
Alignment:-TCTTCGTATAAA
ATATTTACATA--
 A C G T C A G T G A T C G C A T C A G T G A T C C T A G G A C T C T G A C A G T G T C A C T G A C G T A
C G T A G A C T T C G A C G A T C G A T A C G T C T G A G A T C G C T A G A C T C G T A A C G T A C G T