Information for 18-TTTTAGTAGA (Motif 13)

G A C T C G A T G A C T G C A T G C T A C T A G C G A T C T G A T C A G C T G A
Reverse Opposite:
G A C T A G T C G A C T G C T A G A T C C G A T C G T A C T G A G C T A C T G A
p-value:1e-14
log p-value:-3.262e+01
Information Content per bp:1.672
Number of Target Sequences with motif70.0
Percentage of Target Sequences with motif23.65%
Number of Background Sequences with motif3977.7
Percentage of Background Sequences with motif8.62%
Average Position of motif in Targets91.2 +/- 52.1bp
Average Position of motif in Background100.6 +/- 53.2bp
Strand Bias (log2 ratio + to - strand density)0.2
Multiplicity (# of sites on avg that occur together)1.01
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

Hoxd13(Homeobox)/ChickenMSG-Hoxd13.Flag-ChIP-Seq(GSE86088)/Homer

Match Rank:1
Score:0.71
Offset:0
Orientation:reverse strand
Alignment:TTTTAGTAGA
TTTTATTRGN
 G A C T C G A T G A C T G C A T G C T A C T A G C G A T C T G A T C A G C T G A
C G A T A C G T A C G T G C A T C G T A G A C T C A G T C T A G A T C G G A T C

HOXD13/MA0909.1/Jaspar

Match Rank:2
Score:0.71
Offset:-1
Orientation:reverse strand
Alignment:-TTTTAGTAGA
NTTTTATTGG-
 A C G T G A C T C G A T G A C T G C A T G C T A C T A G C G A T C T G A T C A G C T G A
C A G T C A G T A C G T C G A T C G A T C T G A G C A T C A G T C T A G T A C G A C G T

PH0078.1_Hoxd13/Jaspar

Match Rank:3
Score:0.71
Offset:-4
Orientation:reverse strand
Alignment:----TTTTAGTAGA--
NNANTTTTATTGGNNN
 A C G T A C G T A C G T A C G T G A C T C G A T G A C T G C A T G C T A C T A G C G A T C T G A T C A G C T G A A C G T A C G T
C G T A C A T G C T G A C T G A C A G T C G A T C G A T G C A T C T G A G A C T C G A T C T A G T C A G C G A T G C T A C A T G

HOXA13/MA0650.1/Jaspar

Match Rank:4
Score:0.70
Offset:-1
Orientation:reverse strand
Alignment:-TTTTAGTAGA
TTTTTATTGG-
 A C G T G A C T C G A T G A C T G C A T G C T A C T A G C G A T C T G A T C A G C T G A
C A G T A C G T A C G T C G A T C G A T C G T A C G A T C A G T T C A G A T C G A C G T

PH0057.1_Hoxb13/Jaspar

Match Rank:5
Score:0.69
Offset:-4
Orientation:reverse strand
Alignment:----TTTTAGTAGA--
NNAATTTTATTGGNTN
 A C G T A C G T A C G T A C G T G A C T C G A T G A C T G C A T G C T A C T A G C G A T C T G A T C A G C T G A A C G T A C G T
A T G C C T A G C G T A C G T A A C G T C G A T C G A T G C A T C T G A G A C T C A G T C T A G T A C G C A T G G A C T A C G T

PH0075.1_Hoxd10/Jaspar

Match Rank:6
Score:0.69
Offset:-5
Orientation:reverse strand
Alignment:-----TTTTAGTAGA--
NTNAATTTTATTGNATT
 A C G T A C G T A C G T A C G T A C G T G A C T C G A T G A C T G C A T G C T A C T A G C G A T C T G A T C A G C T G A A C G T A C G T
C G T A G C A T G C T A G C T A C T G A A G C T C G A T C G A T C G A T C T G A G C A T C A G T C T A G A G T C T G C A G A C T A C G T

HOXB13(Homeobox)/ProstateTumor-HOXB13-ChIP-Seq(GSE56288)/Homer

Match Rank:7
Score:0.68
Offset:0
Orientation:forward strand
Alignment:TTTTAGTAGA
TTTTATKRGG
 G A C T C G A T G A C T G C A T G C T A C T A G C G A T C T G A T C A G C T G A
C G A T A C G T A C G T A C G T C G T A A G C T C A G T C T A G A T C G A C T G

HOXB13/MA0901.1/Jaspar

Match Rank:8
Score:0.67
Offset:-1
Orientation:reverse strand
Alignment:-TTTTAGTAGA
NTTTTATTGG-
 A C G T G A C T C G A T G A C T G C A T G C T A C T A G C G A T C T G A T C A G C T G A
C A T G C A G T C A G T C G A T G C A T C T G A G C A T C A G T C T A G A T C G A C G T

Hoxa13(Homeobox)/ChickenMSG-Hoxa13.Flag-ChIP-Seq(GSE86088)/Homer

Match Rank:9
Score:0.67
Offset:-1
Orientation:reverse strand
Alignment:-TTTTAGTAGA
NTTTTATDRG-
 A C G T G A C T C G A T G A C T G C A T G C T A C T A G C G A T C T G A T C A G C T G A
C T A G G C A T A C G T G C A T G A C T C G T A G A C T C A T G C T A G A T C G A C G T

PB0116.1_Elf3_2/Jaspar

Match Rank:10
Score:0.66
Offset:-5
Orientation:reverse strand
Alignment:-----TTTTAGTAGA--
GNATTTTTTTTTTGANC
 A C G T A C G T A C G T A C G T A C G T G A C T C G A T G A C T G C A T G C T A C T A G C G A T C T G A T C A G C T G A A C G T A C G T
C T A G G C T A C T G A A C G T C G A T C G A T C G A T C G A T C G A T C G A T C G A T C G A T C A G T C A T G T G C A T C G A G T A C