Information for 19-GTGGAAAAGGAA (Motif 17)

A C T G A C G T C T A G C T A G C G T A C G T A C T G A C G T A T A C G A C T G C G T A C G T A
Reverse Opposite:
A C G T C G A T A G T C A G T C A C G T A G C T A C G T A C G T A G T C A G T C C G T A A G T C
p-value:1e-11
log p-value:-2.584e+01
Information Content per bp:1.886
Number of Target Sequences with motif9.0
Percentage of Target Sequences with motif3.04%
Number of Background Sequences with motif39.0
Percentage of Background Sequences with motif0.08%
Average Position of motif in Targets96.5 +/- 61.4bp
Average Position of motif in Background82.2 +/- 62.3bp
Strand Bias (log2 ratio + to - strand density)2.0
Multiplicity (# of sites on avg that occur together)1.11
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

NFATC2/MA0152.1/Jaspar

Match Rank:1
Score:0.74
Offset:1
Orientation:reverse strand
Alignment:GTGGAAAAGGAA
-TGGAAAA----
 A C T G A C G T C T A G C T A G C G T A C G T A C T G A C G T A T A C G A C T G C G T A C G T A
A C G T C G A T A C T G A C T G C G T A C G T A T C G A G C T A A C G T A C G T A C G T A C G T

NFAT5/MA0606.1/Jaspar

Match Rank:2
Score:0.73
Offset:-1
Orientation:reverse strand
Alignment:-GTGGAAAAGGAA
NATGGAAAAN---
 A C G T A C T G A C G T C T A G C T A G C G T A C G T A C T G A C G T A T A C G A C T G C G T A C G T A
G C T A C T G A C G A T T C A G C T A G C G T A C G T A C G T A C G T A A C G T A C G T A C G T A C G T

NFAT(RHD)/Jurkat-NFATC1-ChIP-Seq(Jolma_et_al.)/Homer

Match Rank:3
Score:0.69
Offset:-1
Orientation:reverse strand
Alignment:-GTGGAAAAGGAA
AATGGAAAAT---
 A C G T A C T G A C G T C T A G C T A G C G T A C G T A C T G A C G T A T A C G A C T G C G T A C G T A
T C G A T C G A A G C T A C T G A C T G C G T A C G T A G T C A T G C A G C A T A C G T A C G T A C G T

STAT1::STAT2/MA0517.1/Jaspar

Match Rank:4
Score:0.68
Offset:2
Orientation:reverse strand
Alignment:GTGGAAAAGGAA-----
--GGAAANTGAAACTNA
 A C T G A C G T C T A G C T A G C G T A C G T A C T G A C G T A T A C G A C T G C G T A C G T A A C G T A C G T A C G T A C G T A C G T
A C G T A C G T T C A G C T A G C T G A C G T A T C G A T G C A G A C T C T A G T C G A C G T A C T G A A T G C G A C T C T A G G T C A

NFATC3/MA0625.1/Jaspar

Match Rank:5
Score:0.66
Offset:-1
Orientation:reverse strand
Alignment:-GTGGAAAAGGAA
AATGGAAAAT---
 A C G T A C T G A C G T C T A G C T A G C G T A C G T A C T G A C G T A T A C G A C T G C G T A C G T A
C G T A C T G A G A C T T A C G C A T G T C G A C G T A G C T A C T G A G C A T A C G T A C G T A C G T

NFATC1/MA0624.1/Jaspar

Match Rank:6
Score:0.65
Offset:-1
Orientation:reverse strand
Alignment:-GTGGAAAAGGAA
NNTGGAAANN---
 A C G T A C T G A C G T C T A G C T A G C G T A C G T A C T G A C G T A T A C G A C T G C G T A C G T A
C G T A C T G A G A C T C T A G A C T G C T G A C T G A G C T A C G T A G C A T A C G T A C G T A C G T

IRF3(IRF)/BMDM-Irf3-ChIP-Seq(GSE67343)/Homer

Match Rank:7
Score:0.63
Offset:3
Orientation:reverse strand
Alignment:GTGGAAAAGGAA---
---GAAAMTGAAACT
 A C T G A C G T C T A G C T A G C G T A C G T A C T G A C G T A T A C G A C T G C G T A C G T A A C G T A C G T A C G T
A C G T A C G T A C G T C T A G T C G A C T G A G T C A T G A C A G C T T C A G T C G A C T G A C G T A A T G C G A C T

IRF1(IRF)/PBMC-IRF1-ChIP-Seq(GSE43036)/Homer

Match Rank:8
Score:0.62
Offset:3
Orientation:forward strand
Alignment:GTGGAAAAGGAA---
---GAAAGTGAAAGT
 A C T G A C G T C T A G C T A G C G T A C G T A C T G A C G T A T A C G A C T G C G T A C G T A A C G T A C G T A C G T
A C G T A C G T A C G T T C A G C T G A C G T A C G T A T A C G G C A T C T A G C T G A C G T A C G T A T A C G G A C T

IRF2/MA0051.1/Jaspar

Match Rank:9
Score:0.62
Offset:2
Orientation:forward strand
Alignment:GTGGAAAAGGAA--------
--GGAAAGCGAAACCAAAAC
 A C T G A C G T C T A G C T A G C G T A C G T A C T G A C G T A T A C G A C T G C G T A C G T A A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T
A C G T A C G T A T C G C T A G C G T A C G T A C G T A C T A G A G C T A C T G C G T A C G T A C G T A A T C G A G T C C T G A C G T A C G T A G C T A G T A C

ISRE(IRF)/ThioMac-LPS-Expression(GSE23622)/Homer

Match Rank:10
Score:0.62
Offset:3
Orientation:reverse strand
Alignment:GTGGAAAAGGAA---
---GAAACTGAAACT
 A C T G A C G T C T A G C T A G C G T A C G T A C T G A C G T A T A C G A C T G C G T A C G T A A C G T A C G T A C G T
A C G T A C G T A C G T T C A G C T G A G T C A C G T A A T G C G A C T A T C G G T C A C T G A C T G A T A G C G A C T