Information for 22-RCCAGGCTGGTC (Motif 19)

T C G A A G T C A G T C G T C A T C A G C T A G A T G C A C G T A C T G C T A G A C G T A T G C
Reverse Opposite:
A T C G T G C A G A T C G T A C C G T A T A C G G A T C A G T C C A G T C T A G T C A G A G C T
p-value:1e-8
log p-value:-1.947e+01
Information Content per bp:1.748
Number of Target Sequences with motif44.0
Percentage of Target Sequences with motif14.86%
Number of Background Sequences with motif2567.4
Percentage of Background Sequences with motif5.56%
Average Position of motif in Targets94.1 +/- 55.5bp
Average Position of motif in Background101.8 +/- 67.6bp
Strand Bias (log2 ratio + to - strand density)0.7
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

GLI2/MA0734.1/Jaspar

Match Rank:1
Score:0.69
Offset:2
Orientation:reverse strand
Alignment:RCCAGGCTGGTC--
--CAGTGTGGTCGC
 T C G A A G T C A G T C G T C A T C A G C T A G A T G C A C G T A C T G C T A G A C G T A T G C A C G T A C G T
A C G T A C G T G A T C G C T A C A T G A C G T A T C G C A G T T A C G C T A G A C G T G T A C A C T G G A T C

Gli2(Zf)/GM2-Gli2-ChIP-Chip(GSE112702)/Homer

Match Rank:2
Score:0.67
Offset:1
Orientation:forward strand
Alignment:RCCAGGCTGGTC-
-YSTGGGTGGTCT
 T C G A A G T C A G T C G T C A T C A G C T A G A T G C A C G T A C T G C T A G A C G T A T G C A C G T
A C G T A G T C A T C G G C A T C A T G A C T G A T C G C G A T C T A G A C T G A G C T T G A C G A C T

GLI3(Zf)/Limb-GLI3-ChIP-Chip(GSE11077)/Homer

Match Rank:3
Score:0.66
Offset:1
Orientation:forward strand
Alignment:RCCAGGCTGGTC-
-CGTGGGTGGTCC
 T C G A A G T C A G T C G T C A T C A G C T A G A T G C A C G T A C T G C T A G A C G T A T G C A C G T
A C G T A G T C A T C G G C A T C T A G A C T G T A C G C G A T T C A G C A T G A G C T T A G C G A T C

PB0196.1_Zbtb7b_2/Jaspar

Match Rank:4
Score:0.63
Offset:0
Orientation:reverse strand
Alignment:RCCAGGCTGGTC-----
NNANTGGTGGTCTTNNN
 T C G A A G T C A G T C G T C A T C A G C T A G A T G C A C G T A C T G C T A G A C G T A T G C A C G T A C G T A C G T A C G T A C G T
T C A G A G C T G T C A T G C A C G A T C T A G C T A G C A G T A T C G C A T G C A G T T G A C A C G T G A C T G T C A G C A T C T A G

ZNF341(Zf)/EBV-ZNF341-ChIP-Seq(GSE113194)/Homer

Match Rank:5
Score:0.60
Offset:3
Orientation:reverse strand
Alignment:RCCAGGCTGGTC-
---CGGCTGTTCC
 T C G A A G T C A G T C G T C A T C A G C T A G A T G C A C G T A C T G C T A G A C G T A T G C A C G T
A C G T A C G T A C G T G A T C T C A G T A C G T A G C G C A T T A C G C A G T A C G T T G A C G A T C

Smad3(MAD)/NPC-Smad3-ChIP-Seq(GSE36673)/Homer

Match Rank:6
Score:0.59
Offset:2
Orientation:forward strand
Alignment:RCCAGGCTGGTC
--TWGTCTGV--
 T C G A A G T C A G T C G T C A T C A G C T A G A T G C A C G T A C T G C T A G A C G T A T G C
A C G T A C G T A G C T G C A T A C T G A C G T A G T C A C G T C T A G T A C G A C G T A C G T

Zic(Zf)/Cerebellum-ZIC1.2-ChIP-Seq(GSE60731)/Homer

Match Rank:7
Score:0.59
Offset:2
Orientation:forward strand
Alignment:RCCAGGCTGGTC
--CCTGCTGAGH
 T C G A A G T C A G T C G T C A T C A G C T A G A T G C A C G T A C T G C T A G A C G T A T G C
A C G T A C G T A G T C G T A C A G C T C T A G A G T C C G A T A C T G C G T A A C T G G T C A

ZNF416(Zf)/HEK293-ZNF416.GFP-ChIP-Seq(GSE58341)/Homer

Match Rank:8
Score:0.59
Offset:3
Orientation:forward strand
Alignment:RCCAGGCTGGTC-
---WDNCTGGGCA
 T C G A A G T C A G T C G T C A T C A G C T A G A T G C A C G T A C T G C T A G A C G T A T G C A C G T
A C G T A C G T A C G T G C A T C T A G G T A C A G T C C G A T A C T G C T A G C T A G G T A C G C T A

Smad2(MAD)/ES-SMAD2-ChIP-Seq(GSE29422)/Homer

Match Rank:9
Score:0.58
Offset:2
Orientation:forward strand
Alignment:RCCAGGCTGGTC
--CTGTCTGG--
 T C G A A G T C A G T C G T C A T C A G C T A G A T G C A C G T A C T G C T A G A C G T A T G C
A C G T A C G T A T G C G A C T A C T G C A G T G A T C A C G T T A C G T A C G A C G T A C G T

ZNF768(Zf)/Rajj-ZNF768-ChIP-Seq(GSE111879)/Homer

Match Rank:10
Score:0.56
Offset:0
Orientation:reverse strand
Alignment:RCCAGGCTGGTC
VCCTCTCTGDDY
 T C G A A G T C A G T C G T C A T C A G C T A G A T G C A C G T A C T G C T A G A C G T A T G C
T G A C T A G C G T A C G C A T A G T C A C G T A T G C C G A T T A C G C G A T C A G T A G T C