Information for 20-GTGTGGTC (Motif 22)

C T A G A C G T A T C G A C G T C T A G C T A G C G A T T A G C
Reverse Opposite:
A T C G G C T A A G T C A G T C C G T A A T G C G T C A A G T C
p-value:1e-5
log p-value:-1.358e+01
Information Content per bp:1.824
Number of Target Sequences with motif42.0
Percentage of Target Sequences with motif14.19%
Number of Background Sequences with motif2954.1
Percentage of Background Sequences with motif6.40%
Average Position of motif in Targets106.6 +/- 56.6bp
Average Position of motif in Background98.6 +/- 62.9bp
Strand Bias (log2 ratio + to - strand density)-1.4
Multiplicity (# of sites on avg that occur together)1.25
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

GLI2/MA0734.1/Jaspar

Match Rank:1
Score:0.85
Offset:-2
Orientation:reverse strand
Alignment:--GTGTGGTC--
CAGTGTGGTCGC
 A C G T A C G T C T A G A C G T A T C G A C G T C T A G C T A G C G A T T A G C A C G T A C G T
G A T C G C T A C A T G A C G T A T C G C A G T T A C G C T A G A C G T G T A C A C T G G A T C

RUNX2(Runt)/PCa-RUNX2-ChIP-Seq(GSE33889)/Homer

Match Rank:2
Score:0.81
Offset:-2
Orientation:reverse strand
Alignment:--GTGTGGTC--
NNHTGTGGTTWN
 A C G T A C G T C T A G A C G T A T C G A C G T C T A G C T A G C G A T T A G C A C G T A C G T
C A T G C G A T G A C T A C G T A C T G A C G T A C T G A C T G A C G T A G C T C G A T A C T G

Gli2(Zf)/GM2-Gli2-ChIP-Chip(GSE112702)/Homer

Match Rank:3
Score:0.80
Offset:-3
Orientation:forward strand
Alignment:---GTGTGGTC-
YSTGGGTGGTCT
 A C G T A C G T A C G T C T A G A C G T A T C G A C G T C T A G C T A G C G A T T A G C A C G T
A G T C A T C G G C A T C A T G A C T G A T C G C G A T C T A G A C T G A G C T T G A C G A C T

GLI3(Zf)/Limb-GLI3-ChIP-Chip(GSE11077)/Homer

Match Rank:4
Score:0.76
Offset:-3
Orientation:forward strand
Alignment:---GTGTGGTC-
CGTGGGTGGTCC
 A C G T A C G T A C G T C T A G A C G T A T C G A C G T C T A G C T A G C G A T T A G C A C G T
A G T C A T C G G C A T C T A G A C T G T A C G C G A T T C A G C A T G A G C T T A G C G A T C

EKLF(Zf)/Erythrocyte-Klf1-ChIP-Seq(GSE20478)/Homer

Match Rank:5
Score:0.75
Offset:-4
Orientation:forward strand
Alignment:----GTGTGGTC
NTGGGTGTGGCC
 A C G T A C G T A C G T A C G T C T A G A C G T A T C G A C G T C T A G C T A G C G A T T A G C
T G A C C G A T A C T G A C T G A C T G G A C T A C T G A C G T A C T G A C T G G A T C G A T C

KLF9/MA1107.1/Jaspar

Match Rank:6
Score:0.74
Offset:-5
Orientation:reverse strand
Alignment:-----GTGTGGTC
NGTGGGTGTGGCN
 A C G T A C G T A C G T A C G T A C G T C T A G A C G T A T C G A C G T C T A G C T A G C G A T T A G C
C T A G T C A G C A G T C T A G A C T G T A C G A G C T T A C G A C G T T A C G A C T G A T G C A G T C

ZNF354C/MA0130.1/Jaspar

Match Rank:7
Score:0.74
Offset:2
Orientation:reverse strand
Alignment:GTGTGGTC
--GTGGAT
 C T A G A C G T A T C G A C G T C T A G C T A G C G A T T A G C
A C G T A C G T A T C G A C G T A C T G A C T G C G T A A C G T

RUNX-AML(Runt)/CD4+-PolII-ChIP-Seq(Barski_et_al.)/Homer

Match Rank:8
Score:0.73
Offset:-1
Orientation:forward strand
Alignment:-GTGTGGTC-
GCTGTGGTTT
 A C G T C T A G A C G T A T C G A C G T C T A G C T A G C G A T T A G C A C G T
A C T G G A T C G A C T A C T G A C G T C A T G A C T G A C G T A G C T C G A T

RUNX(Runt)/HPC7-Runx1-ChIP-Seq(GSE22178)/Homer

Match Rank:9
Score:0.73
Offset:0
Orientation:reverse strand
Alignment:GTGTGGTC--
CTGTGGTTTN
 C T A G A C G T A T C G A C G T C T A G C T A G C G A T T A G C A C G T A C G T
G A T C A C G T A C T G A G C T A C T G A C T G A G C T A G C T C G A T A T C G

RUNX1/MA0002.2/Jaspar

Match Rank:10
Score:0.73
Offset:-2
Orientation:forward strand
Alignment:--GTGTGGTC-
GTCTGTGGTTT
 A C G T A C G T C T A G A C G T A T C G A C G T C T A G C T A G C G A T T A G C A C G T
A C T G A G C T A G T C C G A T A T C G G A C T A C T G A C T G A G C T G A C T C G A T