Information for 23-ACACATATATAT (Motif 23)

G T C A G T A C C T G A A T G C C G T A A G C T T C G A G A C T G T C A A C G T C G T A G C A T
Reverse Opposite:
C G T A C G A T C G T A C A G T C T G A A G C T C T G A G C A T T A C G A G C T A C T G A C G T
p-value:1e-5
log p-value:-1.227e+01
Information Content per bp:1.750
Number of Target Sequences with motif12.0
Percentage of Target Sequences with motif4.05%
Number of Background Sequences with motif358.7
Percentage of Background Sequences with motif0.78%
Average Position of motif in Targets118.0 +/- 32.4bp
Average Position of motif in Background98.9 +/- 57.6bp
Strand Bias (log2 ratio + to - strand density)0.7
Multiplicity (# of sites on avg that occur together)1.17
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

PB0080.1_Tbp_1/Jaspar

Match Rank:1
Score:0.69
Offset:1
Orientation:reverse strand
Alignment:ACACATATATAT-----
-NANTTATATATAANGN
 G T C A G T A C C T G A A T G C C G T A A G C T T C G A G A C T G T C A A C G T C G T A G C A T A C G T A C G T A C G T A C G T A C G T
A C G T A G C T G T C A C A G T C G A T G C A T C G T A G C A T C G T A C G A T C G T A C G A T C G T A G C T A C G T A C T A G C T G A

PB0163.1_Six6_2/Jaspar

Match Rank:2
Score:0.69
Offset:0
Orientation:reverse strand
Alignment:ACACATATATAT-----
ANNNGGATATATCCNNN
 G T C A G T A C C T G A A T G C C G T A A G C T T C G A G A C T G T C A A C G T C G T A G C A T A C G T A C G T A C G T A C G T A C G T
G T C A C T A G C T A G A G T C T C A G C A T G T C G A A C G T T G C A A G C T C T G A A G C T T G A C A T G C T A G C G C T A A C G T

OCT:OCT(POU,Homeobox)/NPC-OCT6-ChIP-Seq(GSE43916)/Homer

Match Rank:3
Score:0.66
Offset:2
Orientation:reverse strand
Alignment:ACACATATATAT-----
--AYATGYATATGCATR
 G T C A G T A C C T G A A T G C C G T A A G C T T C G A G A C T G T C A A C G T C G T A G C A T A C G T A C G T A C G T A C G T A C G T
A C G T A C G T C T G A G A C T C T G A G A C T C T A G G A T C C T G A G A C T C T G A G A C T C T A G G A T C C T G A G C A T C T A G

PB0198.1_Zfp128_2/Jaspar

Match Rank:4
Score:0.60
Offset:1
Orientation:reverse strand
Alignment:ACACATATATAT---
-NNTATANATATACN
 G T C A G T A C C T G A A T G C C G T A A G C T T C G A G A C T G T C A A C G T C G T A G C A T A C G T A C G T A C G T
A C G T A T C G A C T G G C A T C T G A G C A T C T G A G C A T C T G A G A C T C G T A G A C T C G T A G T A C G T C A

Pit1(Homeobox)/GCrat-Pit1-ChIP-Seq(GSE58009)/Homer

Match Rank:5
Score:0.60
Offset:4
Orientation:forward strand
Alignment:ACACATATATAT--
----ATGMATATDC
 G T C A G T A C C T G A A T G C C G T A A G C T T C G A G A C T G T C A A C G T C G T A G C A T A C G T A C G T
A C G T A C G T A C G T A C G T G C T A A C G T C T A G G T A C G C T A G A C T C T G A G C A T C A T G G A T C

OCT:OCT(POU,Homeobox)/NPC-Brn1-ChIP-Seq(GSE35496)/Homer

Match Rank:6
Score:0.59
Offset:1
Orientation:reverse strand
Alignment:ACACATATATAT----
-CTCATGAATATTCAT
 G T C A G T A C C T G A A T G C C G T A A G C T T C G A G A C T G T C A A C G T C G T A G C A T A C G T A C G T A C G T A C G T
A C G T T A G C G A C T G A T C C G T A A C G T T C A G G T C A C G T A A C G T C G T A C G A T A C G T A G T C C G T A C G A T

Brn2(POU,Homeobox)/NPC-Brn2-ChIP-Seq(GSE35496)/Homer

Match Rank:7
Score:0.58
Offset:4
Orientation:forward strand
Alignment:ACACATATATAT--
----ATGAATATTC
 G T C A G T A C C T G A A T G C C G T A A G C T T C G A G A C T G T C A A C G T C G T A G C A T A C G T A C G T
A C G T A C G T A C G T A C G T G C T A A G C T T A C G G T C A C T G A C G A T C T G A G C A T C A G T A G T C

TBP/MA0108.2/Jaspar

Match Rank:8
Score:0.57
Offset:-3
Orientation:reverse strand
Alignment:---ACACATATATAT
NNNNNNCTTTTATAN
 A C G T A C G T A C G T G T C A G T A C C T G A A T G C C G T A A G C T T C G A G A C T G T C A A C G T C G T A G C A T
A T G C T A G C A T G C A T G C A T C G A T G C A G T C G C A T G A C T C G A T G C A T C T G A G C A T T C G A A T G C

POL012.1_TATA-Box/Jaspar

Match Rank:9
Score:0.57
Offset:-3
Orientation:reverse strand
Alignment:---ACACATATATAT
NNNNNNCTTTTATAN
 A C G T A C G T A C G T G T C A G T A C C T G A A T G C C G T A A G C T T C G A G A C T G T C A A C G T C G T A G C A T
A T G C T A G C A T G C A T G C A T C G A T G C A G T C G C A T G A C T C G A T G C A T C T G A G C A T T C G A A T G C

PH0082.1_Irx2/Jaspar

Match Rank:10
Score:0.57
Offset:-4
Orientation:reverse strand
Alignment:----ACACATATATAT-
ANTNTTACATGTATNTA
 A C G T A C G T A C G T A C G T G T C A G T A C C T G A A T G C C G T A A G C T T C G A G A C T G T C A A C G T C G T A G C A T A C G T
C G T A T G C A G C A T G A C T G A C T C G A T C G T A A G T C C G T A G C A T T A C G C G A T G C T A G A C T G C A T C G A T G C T A