Information for 21-CCTTTCTT (Motif 25)

A G T C A G T C A C G T A C G T A G C T A G T C A C G T C G A T
Reverse Opposite:
C G T A T G C A A C T G C T G A C G T A C G T A A C T G C T A G
p-value:1e-2
log p-value:-6.211e+00
Information Content per bp:1.827
Number of Target Sequences with motif53.0
Percentage of Target Sequences with motif17.91%
Number of Background Sequences with motif5545.7
Percentage of Background Sequences with motif12.01%
Average Position of motif in Targets96.5 +/- 52.8bp
Average Position of motif in Background100.6 +/- 67.0bp
Strand Bias (log2 ratio + to - strand density)0.9
Multiplicity (# of sites on avg that occur together)1.91
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

PB0137.1_Irf3_2/Jaspar

Match Rank:1
Score:0.76
Offset:-5
Orientation:reverse strand
Alignment:-----CCTTTCTT-
NNGCACCTTTCTCC
 A C G T A C G T A C G T A C G T A C G T A G T C A G T C A C G T A C G T A G C T A G T C A C G T C G A T A C G T
A G C T G A T C T C A G T A G C G C T A A T G C T A G C G C A T C G A T G C A T G A T C G C A T G T A C G A T C

PRDM1/MA0508.2/Jaspar

Match Rank:2
Score:0.69
Offset:-2
Orientation:forward strand
Alignment:--CCTTTCTT
TCACTTTCAC
 A C G T A C G T A G T C A G T C A C G T A C G T A G C T A G T C A C G T C G A T
G C A T G A T C T C G A G A T C C A G T C G A T G C A T T G A C G C T A G A T C

SOX10/MA0442.2/Jaspar

Match Rank:3
Score:0.69
Offset:-1
Orientation:reverse strand
Alignment:-CCTTTCTT--
NNCTTTGTTNN
 A C G T A G T C A G T C A C G T A C G T A G C T A G T C A C G T C G A T A C G T A C G T
A C G T A G C T T G A C C G A T C G A T C G A T T C A G C G A T A C G T G A C T G A C T

LEF1(HMG)/H1-LEF1-ChIP-Seq(GSE64758)/Homer

Match Rank:4
Score:0.67
Offset:0
Orientation:forward strand
Alignment:CCTTTCTT--
CCTTTGATST
 A G T C A G T C A C G T A C G T A G C T A G T C A C G T C G A T A C G T A C G T
A T G C A G T C A G C T A G C T A C G T A T C G C G T A C G A T T A G C G A C T

Sox3/MA0514.1/Jaspar

Match Rank:5
Score:0.67
Offset:0
Orientation:forward strand
Alignment:CCTTTCTT--
CCTTTGTTTT
 A G T C A G T C A C G T A C G T A G C T A G T C A C G T C G A T A C G T A C G T
A T G C A G T C C G A T A C G T A C G T A T C G A C G T A G C T A G C T A G C T

PB0071.1_Sox4_1/Jaspar

Match Rank:6
Score:0.66
Offset:-4
Orientation:reverse strand
Alignment:----CCTTTCTT-----
TNNTCCTTTGTTCTNNT
 A C G T A C G T A C G T A C G T A G T C A G T C A C G T A C G T A G C T A G T C A C G T C G A T A C G T A C G T A C G T A C G T A C G T
C G A T C G T A T C A G A G C T A G T C A G T C C G A T A C G T C G A T T A C G C G A T A G C T G A T C G C A T G A C T T G A C C A G T

Sox4(HMG)/proB-Sox4-ChIP-Seq(GSE50066)/Homer

Match Rank:7
Score:0.66
Offset:0
Orientation:forward strand
Alignment:CCTTTCTT--
YCTTTGTTCC
 A G T C A G T C A C G T A C G T A G C T A G T C A C G T C G A T A C G T A C G T
A G T C A G T C C G A T A C G T A C G T A C T G A C G T A G C T A G T C A G T C

PB0061.1_Sox11_1/Jaspar

Match Rank:8
Score:0.66
Offset:-4
Orientation:reverse strand
Alignment:----CCTTTCTT-----
NNNTCCTTTGTTCTNNN
 A C G T A C G T A C G T A C G T A G T C A G T C A C G T A C G T A G C T A G T C A C G T C G A T A C G T A C G T A C G T A C G T A C G T
C G A T C G T A T C A G A G C T A G T C G A T C C G A T A C G T C G A T A C T G C G A T A G C T G A T C G C A T G C A T T G C A C G A T

Sox2/MA0143.3/Jaspar

Match Rank:9
Score:0.65
Offset:0
Orientation:forward strand
Alignment:CCTTTCTT
CCTTTGTT
 A G T C A G T C A C G T A C G T A G C T A G T C A C G T C G A T
A G T C A G T C C G A T A C G T A C G T A C T G A C G T A G C T

Nur77(NR)/K562-NR4A1-ChIP-Seq(GSE31363)/Homer

Match Rank:10
Score:0.64
Offset:-3
Orientation:forward strand
Alignment:---CCTTTCTT-
TGACCTTTNCNT
 A C G T A C G T A C G T A G T C A G T C A C G T A C G T A G C T A G T C A C G T C G A T A C G T
A C G T C T A G C G T A A G T C G T A C A C G T A C G T A C G T G T C A G T A C T G A C G A C T