Information for 6-ATCTGCAAGTGG (Motif 4)

C T G A C G A T A G T C A C G T A C T G A T G C C G T A C G T A A C T G A C G T A C T G A C T G
Reverse Opposite:
G T A C A G T C C G T A G T A C A C G T A C G T A T C G A G T C C G T A C T A G C G T A G A C T
p-value:1e-38
log p-value:-8.939e+01
Information Content per bp:1.902
Number of Target Sequences with motif17.0
Percentage of Target Sequences with motif5.74%
Number of Background Sequences with motif6.8
Percentage of Background Sequences with motif0.01%
Average Position of motif in Targets103.0 +/- 55.4bp
Average Position of motif in Background81.4 +/- 70.2bp
Strand Bias (log2 ratio + to - strand density)4.2
Multiplicity (# of sites on avg that occur together)1.12
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

PH0111.1_Nkx2-2/Jaspar

Match Rank:1
Score:0.67
Offset:-1
Orientation:reverse strand
Alignment:-ATCTGCAAGTGG----
NANTTTCAAGTGGTTAN
 A C G T C T G A C G A T A G T C A C G T A C T G A T G C C G T A C G T A A C T G A C G T A C T G A C T G A C G T A C G T A C G T A C G T
G C T A T G C A G C A T G C A T A G C T G C A T A G T C C T G A C G T A A C T G C G A T C T A G A T C G G A C T A G C T G C T A C G A T

NKX2-3/MA0672.1/Jaspar

Match Rank:2
Score:0.67
Offset:3
Orientation:reverse strand
Alignment:ATCTGCAAGTGG-
---NTCAAGTGGN
 C T G A C G A T A G T C A C G T A C T G A T G C C G T A C G T A A C T G A C G T A C T G A C T G A C G T
A C G T A C G T A C G T A G C T G C A T A G T C C T G A G T C A A C T G C G A T C T A G A T C G A C G T

PH0114.1_Nkx2-5/Jaspar

Match Rank:3
Score:0.65
Offset:0
Orientation:reverse strand
Alignment:ATCTGCAAGTGG----
AAATTCAAGTGGNTTN
 C T G A C G A T A G T C A C G T A C T G A T G C C G T A C G T A A C T G A C G T A C T G A C T G A C G T A C G T A C G T A C G T
C T G A C T G A C G T A A G C T G C A T A G T C C T G A C G T A A C T G C G A T C T A G A T C G G T A C G A C T G A C T C G T A

PH0171.1_Nkx2-1/Jaspar

Match Rank:4
Score:0.65
Offset:0
Orientation:reverse strand
Alignment:ATCTGCAAGTGG----
AANTTCAAGTGGCTTN
 C T G A C G A T A G T C A C G T A C T G A T G C C G T A C G T A A C T G A C G T A C T G A C T G A C G T A C G T A C G T A C G T
C G T A C G T A C A G T A C G T G C A T A G T C C T G A C G T A A C T G C G A T C T A G A T C G T A G C G A C T A C G T T C G A

NKX2-8/MA0673.1/Jaspar

Match Rank:5
Score:0.64
Offset:3
Orientation:reverse strand
Alignment:ATCTGCAAGTGG
---NTCAAGTGG
 C T G A C G A T A G T C A C G T A C T G A T G C C G T A C G T A A C T G A C G T A C T G A C T G
A C G T A C G T A C G T A G C T C G A T A T G C C T G A C T G A C T A G C A G T C T A G A T C G

Oct2(POU,Homeobox)/Bcell-Oct2-ChIP-Seq(GSE21512)/Homer

Match Rank:6
Score:0.64
Offset:0
Orientation:forward strand
Alignment:ATCTGCAAGTGG
ATATGCAAAT--
 C T G A C G A T A G T C A C G T A C T G A T G C C G T A C G T A A C T G A C G T A C T G A C T G
G T C A G C A T G C T A C A G T C T A G G A T C C G T A C T G A C G T A C G A T A C G T A C G T

MYC/MA0147.3/Jaspar

Match Rank:7
Score:0.63
Offset:2
Orientation:reverse strand
Alignment:ATCTGCAAGTGG--
--NNGCACGTGGNN
 C T G A C G A T A G T C A C G T A C T G A T G C C G T A C G T A A C T G A C G T A C T G A C T G A C G T A C G T
A C G T A C G T T A C G T C A G T A C G T A G C T C G A A G T C T C A G G A C T A C T G A T C G A T G C A T G C

PH0113.1_Nkx2-4/Jaspar

Match Rank:8
Score:0.62
Offset:0
Orientation:reverse strand
Alignment:ATCTGCAAGTGG----
AATTTCAAGTGGCTTN
 C T G A C G A T A G T C A C G T A C T G A T G C C G T A C G T A A C T G A C G T A C T G A C T G A C G T A C G T A C G T A C G T
C T G A C G T A C G A T A C G T G C A T A G T C C T G A C G T A A C T G C G A T C T A G A T C G A G T C G C A T G A C T C G T A

MXI1/MA1108.1/Jaspar

Match Rank:9
Score:0.61
Offset:2
Orientation:reverse strand
Alignment:ATCTGCAAGTGG---
--NNGCACGTGGNNN
 C T G A C G A T A G T C A C G T A C T G A T G C C G T A C G T A A C T G A C G T A C T G A C T G A C G T A C G T A C G T
A C G T A C G T T A C G T A C G T A C G T A G C T C G A A G T C T C A G A G C T A C T G A T C G A G C T A T G C A T C G

Slug(Zf)/Mesoderm-Snai2-ChIP-Seq(GSE61475)/Homer

Match Rank:10
Score:0.61
Offset:2
Orientation:reverse strand
Alignment:ATCTGCAAGTGG--
--SDGCAGGTGCNS
 C T G A C G A T A G T C A C G T A C T G A T G C C G T A C G T A A C T G A C G T A C T G A C T G A C G T A C G T
A C G T A C G T A T C G C T A G C T A G A G T C C G T A A C T G A C T G A C G T A C T G A T G C G A T C A T G C