Information for 2-CAACATTG (Motif 14)

A G T C T C G A C G T A T G A C G T C A C G A T A C G T C A T G
Reverse Opposite:
G T A C T G C A G C T A C A G T A C T G G C A T A G C T T C A G
p-value:1e-8
log p-value:-1.893e+01
Information Content per bp:1.598
Number of Target Sequences with motif213.0
Percentage of Target Sequences with motif33.39%
Number of Background Sequences with motif11438.6
Percentage of Background Sequences with motif23.37%
Average Position of motif in Targets94.5 +/- 57.7bp
Average Position of motif in Background99.6 +/- 60.8bp
Strand Bias (log2 ratio + to - strand density)0.1
Multiplicity (# of sites on avg that occur together)1.16
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

Sox17/MA0078.1/Jaspar

Match Rank:1
Score:0.69
Offset:1
Orientation:forward strand
Alignment:CAACATTG--
-CTCATTGTC
 A G T C T C G A C G T A T G A C G T C A C G A T A C G T C A T G A C G T A C G T
A C G T G A C T G A C T G A T C C G T A A G C T A C G T A C T G A C G T A T G C

SOX13/MA1120.1/Jaspar

Match Rank:2
Score:0.68
Offset:0
Orientation:reverse strand
Alignment:CAACATTG---
NNCCATTGTNN
 A G T C T C G A C G T A T G A C G T C A C G A T A C G T C A T G A C G T A C G T A C G T
C G A T A C T G A G T C G A T C C G T A G A C T C G A T T C A G G A C T A G C T G A C T

YY1/MA0095.2/Jaspar

Match Rank:3
Score:0.66
Offset:0
Orientation:forward strand
Alignment:CAACATTG----
CAAGATGGCGGC
 A G T C T C G A C G T A T G A C G T C A C G A T A C G T C A T G A C G T A C G T A C G T A C G T
T G A C C T G A T C G A T C A G C G T A A G C T C T A G C T A G G T A C A C T G T C A G G T A C

Arid5a/MA0602.1/Jaspar

Match Rank:4
Score:0.65
Offset:-1
Orientation:forward strand
Alignment:-CAACATTG-----
CTAATATTGCTAAA
 A C G T A G T C T C G A C G T A T G A C G T C A C G A T A C G T C A T G A C G T A C G T A C G T A C G T A C G T
T A G C G A C T C T G A C G T A C G A T C G T A C G A T A G C T C T A G T G A C C G A T C T G A C G T A G C T A

PB0002.1_Arid5a_1/Jaspar

Match Rank:5
Score:0.65
Offset:-1
Orientation:forward strand
Alignment:-CAACATTG-----
CTAATATTGCTAAA
 A C G T A G T C T C G A C G T A T G A C G T C A C G A T A C G T C A T G A C G T A C G T A C G T A C G T A C G T
T A G C G A C T C T G A C G T A C G A T C G T A C G A T A G C T C T A G T G A C C G A T C T G A C G T A G C T A

Sox17(HMG)/Endoderm-Sox17-ChIP-Seq(GSE61475)/Homer

Match Rank:6
Score:0.64
Offset:2
Orientation:forward strand
Alignment:CAACATTG----
--CCATTGTTYB
 A G T C T C G A C G T A T G A C G T C A C G A T A C G T C A T G A C G T A C G T A C G T A C G T
A C G T A C G T A T G C G A T C C G T A A G C T C A G T A T C G G C A T A G C T G A C T A C T G

Sox10(HMG)/SciaticNerve-Sox3-ChIP-Seq(GSE35132)/Homer

Match Rank:7
Score:0.63
Offset:2
Orientation:forward strand
Alignment:CAACATTG----
--CCWTTGTYYB
 A G T C T C G A C G T A T G A C G T C A C G A T A C G T C A T G A C G T A C G T A C G T A C G T
A C G T A C G T A T G C A G T C G C A T A G C T A C G T T C A G C G A T A G C T G A T C A T C G

DMRT1(DM)/Testis-DMRT1-ChIP-Seq(GSE64892)/Homer

Match Rank:8
Score:0.62
Offset:-3
Orientation:forward strand
Alignment:---CAACATTG----
TWGHWACAWTGTWDC
 A C G T A C G T A C G T A G T C T C G A C G T A T G A C G T C A C G A T A C G T C A T G A C G T A C G T A C G T A C G T
G C A T C G A T C T A G G C T A G C A T C G T A G A T C G C T A C G A T C G A T C T A G C G A T C G T A C G A T G A T C

PB0121.1_Foxj3_2/Jaspar

Match Rank:9
Score:0.62
Offset:-7
Orientation:forward strand
Alignment:-------CAACATTG--
AACACCAAAACAAAGGA
 A C G T A C G T A C G T A C G T A C G T A C G T A C G T A G T C T C G A C G T A T G A C G T C A C G A T A C G T C A T G A C G T A C G T
G T C A C G T A A G T C C T G A G A T C G A T C T G C A G C T A G T C A C G T A A G T C C G T A C G T A G C T A C A T G T A C G C G T A

DMRT6(DM)/Testis-DMRT6-ChIP-Seq(GSE60440)/Homer

Match Rank:10
Score:0.62
Offset:-1
Orientation:reverse strand
Alignment:-CAACATTG------
GHTACAWTGTADCHR
 A C G T A G T C T C G A C G T A T G A C G T C A C G A T A C G T C A T G A C G T A C G T A C G T A C G T A C G T A C G T
C T A G G T C A G C A T C G T A A T G C G C T A C G T A C G A T T C A G G C A T C G T A C G A T G T A C G C T A C T G A