Information for 3-AAGTAGCT (Motif 15)

C T G A C T G A A C T G G A C T C G T A A C T G A G T C C G A T
Reverse Opposite:
C G T A A C T G A G T C A C G T C T G A G T A C A G C T A G C T
p-value:1e-8
log p-value:-1.847e+01
Information Content per bp:1.849
Number of Target Sequences with motif131.0
Percentage of Target Sequences with motif20.53%
Number of Background Sequences with motif6137.5
Percentage of Background Sequences with motif12.54%
Average Position of motif in Targets96.0 +/- 52.6bp
Average Position of motif in Background99.1 +/- 54.7bp
Strand Bias (log2 ratio + to - strand density)-0.3
Multiplicity (# of sites on avg that occur together)1.21
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

PB0155.1_Osr2_2/Jaspar

Match Rank:1
Score:0.76
Offset:-5
Orientation:reverse strand
Alignment:-----AAGTAGCT---
NNTGTAGGTAGCANNT
 A C G T A C G T A C G T A C G T A C G T C T G A C T G A A C T G G A C T C G T A A C T G A G T C C G A T A C G T A C G T A C G T
A C T G C T A G C G A T C A T G A G C T C G T A C T A G A C T G C G A T C T G A T A C G A G T C C T G A C T G A C T A G G A C T

PB0154.1_Osr1_2/Jaspar

Match Rank:2
Score:0.76
Offset:-5
Orientation:reverse strand
Alignment:-----AAGTAGCT---
NNNTTAGGTAGCNTNT
 A C G T A C G T A C G T A C G T A C G T C T G A C T G A A C T G G A C T C G T A A C T G A G T C C G A T A C G T A C G T A C G T
A C T G C A G T G C T A C A G T A G C T C G T A C T A G A C T G C G A T C T G A C T A G A G T C C T G A C G A T C T A G G A C T

ASCL1/MA1100.1/Jaspar

Match Rank:3
Score:0.70
Offset:-1
Orientation:forward strand
Alignment:-AAGTAGCT----
GCAGCAGCTGGCG
 A C G T C T G A C T G A A C T G G A C T C G T A A C T G A G T C C G A T A C G T A C G T A C G T A C G T
T A C G T A G C C T G A T C A G T A G C C G T A A T C G T A G C A C G T A T C G A T C G A T G C T A C G

PB0051.1_Osr2_1/Jaspar

Match Rank:4
Score:0.69
Offset:-5
Orientation:forward strand
Alignment:-----AAGTAGCT---
ATGTACAGTAGCAAAG
 A C G T A C G T A C G T A C G T A C G T C T G A C T G A A C T G G A C T C G T A A C T G A G T C C G A T A C G T A C G T A C G T
G C A T C G A T T C A G G C A T G T C A G A T C C T G A A C T G C G A T C T G A A C T G A G T C G C T A G T C A G C T A C T A G

PB0050.1_Osr1_1/Jaspar

Match Rank:5
Score:0.69
Offset:-5
Orientation:forward strand
Alignment:-----AAGTAGCT---
ATTTACAGTAGCAAAA
 A C G T A C G T A C G T A C G T A C G T C T G A C T G A A C T G G A C T C G T A A C T G A G T C C G A T A C G T A C G T A C G T
G C A T G C A T C G A T G C A T G T C A G A T C C T G A A C T G C G A T C T G A C T A G A G T C G C T A T G C A G C T A C T G A

POL010.1_DCE_S_III/Jaspar

Match Rank:6
Score:0.67
Offset:4
Orientation:reverse strand
Alignment:AAGTAGCT-
----NGCTN
 C T G A C T G A A C T G G A C T C G T A A C T G A G T C C G A T A C G T
A C G T A C G T A C G T A C G T T A C G A C T G A G T C A C G T A T C G

Ascl2/MA0816.1/Jaspar

Match Rank:7
Score:0.66
Offset:1
Orientation:reverse strand
Alignment:AAGTAGCT---
-AGCAGCTGCT
 C T G A C T G A A C T G G A C T C G T A A C T G A G T C C G A T A C G T A C G T A C G T
A C G T C T G A T C A G T G A C C G T A A C T G T A G C C G A T C A T G A G T C A G C T

MyoD(bHLH)/Myotube-MyoD-ChIP-Seq(GSE21614)/Homer

Match Rank:8
Score:0.65
Offset:-1
Orientation:reverse strand
Alignment:-AAGTAGCT---
NNAGCAGCTGCT
 A C G T C T G A C T G A A C T G G A C T C G T A A C T G A G T C C G A T A C G T A C G T A C G T
T C A G T A G C C T G A T C A G A G T C C G T A A T C G A T G C C G A T A C T G A G T C G A C T

PH0045.1_Hoxa1/Jaspar

Match Rank:9
Score:0.65
Offset:-5
Orientation:reverse strand
Alignment:-----AAGTAGCT---
ACGGTAATTAGCTCAG
 A C G T A C G T A C G T A C G T A C G T C T G A C T G A A C T G G A C T C G T A A C T G A G T C C G A T A C G T A C G T A C G T
T C G A T G A C C T A G A C T G A G C T G T C A C G T A A C G T A C G T C T G A T A C G A G T C G A C T G A T C C T G A C T A G

PH0074.1_Hoxd1/Jaspar

Match Rank:10
Score:0.64
Offset:-6
Orientation:forward strand
Alignment:------AAGTAGCT---
TAAACTAATTAGCTGTA
 A C G T A C G T A C G T A C G T A C G T A C G T C T G A C T G A A C T G G A C T C G T A A C T G A G T C C G A T A C G T A C G T A C G T
C G A T T C G A G C T A T C A G A G T C G A C T T G C A C G T A C G A T A C G T C T G A T C A G A G T C A C G T A C T G C A G T G C T A