Information for 2-AAACCMTGTA (Motif 2)

C G T A C G T A T C G A A T G C G T A C G T A C G A C T C T A G A C G T G C T A
Reverse Opposite:
C G A T T G C A A G T C C T G A C A T G C A T G T A C G A G C T G C A T G C A T
p-value:1e-13
log p-value:-3.058e+01
Information Content per bp:1.535
Number of Target Sequences with motif63.0
Percentage of Target Sequences with motif9.87%
Number of Background Sequences with motif1636.3
Percentage of Background Sequences with motif3.34%
Average Position of motif in Targets91.3 +/- 53.6bp
Average Position of motif in Background101.3 +/- 57.5bp
Strand Bias (log2 ratio + to - strand density)-0.1
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

PRDM15(Zf)/ESC-Prdm15-ChIP-Seq(GSE73694)/Homer

Match Rank:1
Score:0.66
Offset:0
Orientation:reverse strand
Alignment:AAACCMTGTA-----
AAAACCTGGANHGGR
 C G T A C G T A T C G A A T G C G T A C G T A C G A C T C T A G A C G T G C T A A C G T A C G T A C G T A C G T A C G T
C T G A C T G A T C G A T C G A A G T C T G A C G A C T A C T G C T A G G T C A T A G C G C A T T C A G C T A G T C A G

DMRT6(DM)/Testis-DMRT6-ChIP-Seq(GSE60440)/Homer

Match Rank:2
Score:0.58
Offset:-1
Orientation:reverse strand
Alignment:-AAACCMTGTA----
GHTACAWTGTADCHR
 A C G T C G T A C G T A T C G A A T G C G T A C G T A C G A C T C T A G A C G T G C T A A C G T A C G T A C G T A C G T
C T A G G T C A G C A T C G T A A T G C G C T A C G T A C G A T T C A G G C A T C G T A C G A T G T A C G C T A C T G A

DMRT1(DM)/Testis-DMRT1-ChIP-Seq(GSE64892)/Homer

Match Rank:3
Score:0.58
Offset:-1
Orientation:reverse strand
Alignment:-AAACCMTGTA----
GHWACAWTGTWDCWA
 A C G T C G T A C G T A T C G A A T G C G T A C G T A C G A C T C T A G A C G T G C T A A C G T A C G T A C G T A C G T
C T A G G C T A G C A T G C T A G A T C G C T A G C T A C G A T C T A G G C A T C G T A C G A T G A T C G C T A C G T A

Sox17(HMG)/Endoderm-Sox17-ChIP-Seq(GSE61475)/Homer

Match Rank:4
Score:0.58
Offset:-1
Orientation:reverse strand
Alignment:-AAACCMTGTA
VRAACAATGG-
 A C G T C G T A C G T A T C G A A T G C G T A C G T A C G A C T C T A G A C G T G C T A
T G A C C T G A T C G A C G T A T A G C G T C A T C G A G C A T C T A G T A C G A C G T

SOX9/MA0077.1/Jaspar

Match Rank:5
Score:0.57
Offset:0
Orientation:reverse strand
Alignment:AAACCMTGTA
GAACAATGG-
 C G T A C G T A T C G A A T G C G T A C G T A C G A C T C T A G A C G T G C T A
C T A G C G T A G C T A A G T C G C T A G C T A C G A T C T A G T A C G A C G T

Sox5/MA0087.1/Jaspar

Match Rank:6
Score:0.57
Offset:0
Orientation:reverse strand
Alignment:AAACCMTGTA
NAACAAT---
 C G T A C G T A T C G A A T G C G T A C G T A C G A C T C T A G A C G T G C T A
G C A T C G T A C T G A A G T C C G T A G T C A A C G T A C G T A C G T A C G T

SOX13/MA1120.1/Jaspar

Match Rank:7
Score:0.56
Offset:0
Orientation:forward strand
Alignment:AAACCMTGTA-
AAACAATGGCA
 C G T A C G T A T C G A A T G C G T A C G T A C G A C T C T A G A C G T G C T A A C G T
C T G A T C G A C T G A A G T C G C T A C T G A G C A T C T A G T C A G T G A C G C T A

Foxq1/MA0040.1/Jaspar

Match Rank:8
Score:0.55
Offset:-3
Orientation:reverse strand
Alignment:---AAACCMTGTA
AATAAACAATN--
 A C G T A C G T A C G T C G T A C G T A T C G A A T G C G T A C G T A C G A C T C T A G A C G T G C T A
G C T A T G C A A G C T C G T A C G T A C G T A A G T C C G T A C G T A A G C T C G T A A C G T A C G T

Gfi1b/MA0483.1/Jaspar

Match Rank:9
Score:0.55
Offset:-1
Orientation:forward strand
Alignment:-AAACCMTGTA
AAATCACAGCA
 A C G T C G T A C G T A T C G A A T G C G T A C G T A C G A C T C T A G A C G T G C T A
T G C A C G T A C T G A A G C T A G T C G C T A T A G C C G T A C T A G G A T C G C T A

Sox6/MA0515.1/Jaspar

Match Rank:10
Score:0.54
Offset:-1
Orientation:reverse strand
Alignment:-AAACCMTGTA
AAAACAATGG-
 A C G T C G T A C G T A T C G A A T G C G T A C G T A C G A C T C T A G A C G T G C T A
T C G A C T G A T C G A C G T A A G T C C G T A C G T A C G A T C T A G T C A G A C G T