Information for 19-ATATTCTATG (Motif 24)

T C G A A G C T G T C A A G C T A C G T G T A C A C G T C G T A A C G T A T C G
Reverse Opposite:
A T G C G T C A A C G T C G T A C A T G C G T A C T G A C A G T C T G A A G C T
p-value:1e-5
log p-value:-1.216e+01
Information Content per bp:1.818
Number of Target Sequences with motif13.0
Percentage of Target Sequences with motif2.04%
Number of Background Sequences with motif208.3
Percentage of Background Sequences with motif0.43%
Average Position of motif in Targets115.6 +/- 46.7bp
Average Position of motif in Background101.6 +/- 57.3bp
Strand Bias (log2 ratio + to - strand density)0.6
Multiplicity (# of sites on avg that occur together)1.54
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

Cdx2(Homeobox)/mES-Cdx2-ChIP-Seq(GSE14586)/Homer

Match Rank:1
Score:0.62
Offset:2
Orientation:reverse strand
Alignment:ATATTCTATG--
--NTTTTATGAC
 T C G A A G C T G T C A A G C T A C G T G T A C A C G T C G T A A C G T A T C G A C G T A C G T
A C G T A C G T C T G A C G A T A C G T A C G T A C G T C G T A A C G T C A T G C T G A A G T C

CDX2/MA0465.1/Jaspar

Match Rank:2
Score:0.61
Offset:3
Orientation:reverse strand
Alignment:ATATTCTATG----
---TTTTATGGCTN
 T C G A A G C T G T C A A G C T A C G T G T A C A C G T C G T A A C G T A T C G A C G T A C G T A C G T A C G T
A C G T A C G T A C G T A G C T A C G T A C G T A C G T C G T A A C G T C A T G C T A G A G T C G A C T A G C T

Oct4:Sox17(POU,Homeobox,HMG)/F9-Sox17-ChIP-Seq(GSE44553)/Homer

Match Rank:3
Score:0.61
Offset:0
Orientation:forward strand
Alignment:ATATTCTATG-----
CCATTGTATGCAAAT
 T C G A A G C T G T C A A G C T A C G T G T A C A C G T C G T A A C G T A T C G A C G T A C G T A C G T A C G T A C G T
A G T C G A T C G C T A C G A T A C G T T A C G G C A T C T G A G A C T A C T G A G T C G C T A C T G A T C G A C A G T

PH0075.1_Hoxd10/Jaspar

Match Rank:4
Score:0.59
Offset:-2
Orientation:reverse strand
Alignment:--ATATTCTATG-----
NTNAATTTTATTGNATT
 A C G T A C G T T C G A A G C T G T C A A G C T A C G T G T A C A C G T C G T A A C G T A T C G A C G T A C G T A C G T A C G T A C G T
C G T A G C A T G C T A G C T A C T G A A G C T C G A T C G A T C G A T C T G A G C A T C A G T C T A G A G T C T G C A G A C T A C G T

CDX1/MA0878.1/Jaspar

Match Rank:5
Score:0.59
Offset:3
Orientation:reverse strand
Alignment:ATATTCTATG--
---TTTTATTGC
 T C G A A G C T G T C A A G C T A C G T G T A C A C G T C G T A A C G T A T C G A C G T A C G T
A C G T A C G T A C G T C A G T C G A T G C A T C G A T C G T A A G C T C A G T C T A G A G T C

PH0064.1_Hoxb9/Jaspar

Match Rank:6
Score:0.58
Offset:-1
Orientation:reverse strand
Alignment:-ATATTCTATG-----
NGANTTTTATGGCTCN
 A C G T T C G A A G C T G T C A A G C T A C G T G T A C A C G T C G T A A C G T A T C G A C G T A C G T A C G T A C G T A C G T
G A T C C A T G C T G A C G T A G C A T C G A T C G A T C G A T C G T A A G C T C A T G C T A G T A G C A G C T A G T C A G C T

CDX4(Homeobox)/ZebrafishEmbryos-Cdx4.Myc-ChIP-Seq(GSE48254)/Homer

Match Rank:7
Score:0.58
Offset:1
Orientation:reverse strand
Alignment:ATATTCTATG---
-DGWTTTATGRCN
 T C G A A G C T G T C A A G C T A C G T G T A C A C G T C G T A A C G T A T C G A C G T A C G T A C G T
A C G T C A G T C A T G G C A T C G A T C G A T C G A T C T G A A G C T C A T G C T A G A G T C A T G C

HOXB13(Homeobox)/ProstateTumor-HOXB13-ChIP-Seq(GSE56288)/Homer

Match Rank:8
Score:0.57
Offset:3
Orientation:forward strand
Alignment:ATATTCTATG---
---TTTTATKRGG
 T C G A A G C T G T C A A G C T A C G T G T A C A C G T C G T A A C G T A T C G A C G T A C G T A C G T
A C G T A C G T A C G T C G A T A C G T A C G T A C G T C G T A A G C T C A G T C T A G A T C G A C T G

TEAD4/MA0809.1/Jaspar

Match Rank:9
Score:0.57
Offset:-1
Orientation:forward strand
Alignment:-ATATTCTATG
CACATTCCAT-
 A C G T T C G A A G C T G T C A A G C T A C G T G T A C A C G T C G T A A C G T A T C G
G T A C C T G A T G A C C G T A C G A T C G A T A G T C G A T C C G T A G A C T A C G T

HOXD13/MA0909.1/Jaspar

Match Rank:10
Score:0.57
Offset:2
Orientation:reverse strand
Alignment:ATATTCTATG--
--NTTTTATTGG
 T C G A A G C T G T C A A G C T A C G T G T A C A C G T C G T A A C G T A T C G A C G T A C G T
A C G T A C G T C A G T C A G T A C G T C G A T C G A T C T G A G C A T C A G T C T A G T A C G