Information for 12-GGAGGCCGAG (Motif 13)

A C T G A C T G C G T A A C T G C T A G A G T C A T G C C T A G C G T A A C T G
Reverse Opposite:
A G T C A C G T A G T C T A C G C T A G G A T C A G T C A C G T G T A C A G T C
p-value:1e-13
log p-value:-3.068e+01
Information Content per bp:1.837
Number of Target Sequences with motif208.0
Percentage of Target Sequences with motif31.85%
Number of Background Sequences with motif9051.5
Percentage of Background Sequences with motif19.49%
Average Position of motif in Targets98.3 +/- 57.8bp
Average Position of motif in Background99.1 +/- 63.8bp
Strand Bias (log2 ratio + to - strand density)0.4
Multiplicity (# of sites on avg that occur together)1.91
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

ZNF519(Zf)/HEK293-ZNF519.GFP-ChIP-Seq(GSE58341)/Homer

Match Rank:1
Score:0.80
Offset:1
Orientation:forward strand
Alignment:GGAGGCCGAG-
-GAGSCCGAGC
 A C T G A C T G C G T A A C T G C T A G A G T C A T G C C T A G C G T A A C T G A C G T
A C G T A C T G C G T A A C T G A T G C T G A C G A T C A T C G T G C A A C T G A G T C

Sp5(Zf)/mES-Sp5.Flag-ChIP-Seq(GSE72989)/Homer

Match Rank:2
Score:0.66
Offset:-1
Orientation:forward strand
Alignment:-GGAGGCCGAG-
RGKGGGCGGAGC
 A C G T A C T G A C T G C G T A A C T G C T A G A G T C A T G C C T A G C G T A A C T G A C G T
C T G A T C A G C A G T C T A G A C T G C T A G G A T C A T C G A C T G C T G A T C A G G A T C

Zfx/MA0146.2/Jaspar

Match Rank:3
Score:0.65
Offset:1
Orientation:reverse strand
Alignment:GGAGGCCGAG-----
-CAGGCCNNGGCCNN
 A C T G A C T G C G T A A C T G C T A G A G T C A T G C C T A G C G T A A C T G A C G T A C G T A C G T A C G T A C G T
A C G T A T G C C T G A C T A G A C T G T A G C A G T C A C G T T G A C C T A G T A C G G A T C A T G C T A G C T A G C

GLIS3(Zf)/Thyroid-Glis3.GFP-ChIP-Seq(GSE103297)/Homer

Match Rank:4
Score:0.61
Offset:-7
Orientation:forward strand
Alignment:-------GGAGGCCGAG
CTCCCTGGGAGGCCN--
 A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C T G A C T G C G T A A C T G C T A G A G T C A T G C C T A G C G T A A C T G
T A G C G C A T A G T C G A T C A T G C G A C T C T A G A C T G A C T G C T G A A C T G C T A G A G T C T G A C C G A T A C G T A C G T

ZNF711(Zf)/SHSY5Y-ZNF711-ChIP-Seq(GSE20673)/Homer

Match Rank:5
Score:0.61
Offset:2
Orientation:forward strand
Alignment:GGAGGCCGAG
--AGGCCTAG
 A C T G A C T G C G T A A C T G C T A G A G T C A T G C C T A G C G T A A C T G
A C G T A C G T T G C A A C T G T A C G A T G C A G T C G A C T T C G A A T C G

Zac1(Zf)/Neuro2A-Plagl1-ChIP-Seq(GSE75942)/Homer

Match Rank:6
Score:0.60
Offset:-2
Orientation:forward strand
Alignment:--GGAGGCCGAG
HAWGRGGCCM--
 A C G T A C G T A C T G A C T G C G T A A C T G C T A G A G T C A T G C C T A G C G T A A C T G
G A C T T C G A C G A T T A C G C T A G T A C G A C T G A T G C G T A C G T A C A C G T A C G T

ZFX(Zf)/mES-Zfx-ChIP-Seq(GSE11431)/Homer

Match Rank:7
Score:0.60
Offset:2
Orientation:forward strand
Alignment:GGAGGCCGAG
--AGGCCTNG
 A C T G A C T G C G T A A C T G C T A G A G T C A T G C C T A G C G T A A C T G
A C G T A C G T C T G A A C T G A C T G A G T C A G T C A G C T C T A G T A C G

SP1/MA0079.3/Jaspar

Match Rank:8
Score:0.60
Offset:0
Orientation:reverse strand
Alignment:GGAGGCCGAG-
GGGGGCGGGGC
 A C T G A C T G C G T A A C T G C T A G A G T C A T G C C T A G C G T A A C T G A C G T
T C A G C T A G C T A G A C T G A C T G G T A C C T A G A C T G C T A G T C A G T G A C

POL003.1_GC-box/Jaspar

Match Rank:9
Score:0.58
Offset:-1
Orientation:forward strand
Alignment:-GGAGGCCGAG---
AGGGGGCGGGGCTG
 A C G T A C T G A C T G C G T A A C T G C T A G A G T C A T G C C T A G C G T A A C T G A C G T A C G T A C G T
C G T A C T A G C A T G T C A G A C T G C T A G G T A C C T A G A C T G C T A G C A T G A G T C A G C T C A T G

ZNF165(Zf)/WHIM12-ZNF165-ChIP-Seq(GSE65937)/Homer

Match Rank:10
Score:0.58
Offset:-2
Orientation:forward strand
Alignment:--GGAGGCCGAG---
AAGGKGRCGCAGGCA
 A C G T A C G T A C T G A C T G C G T A A C T G C T A G A G T C A T G C C T A G C G T A A C T G A C G T A C G T A C G T
T G C A C G T A A C T G T C A G C A G T C A T G T C A G G A T C T A C G A G T C T G C A A C T G A C T G T G A C G T C A