Information for 9-CAAGTGTT (Motif 15)

A G T C C G T A C T G A A C T G C G A T A C T G C G A T A C G T
Reverse Opposite:
C G T A C G T A A G T C C G T A A G T C A G C T A C G T A C T G
p-value:1e-11
log p-value:-2.656e+01
Information Content per bp:1.910
Number of Target Sequences with motif175.0
Percentage of Target Sequences with motif26.80%
Number of Background Sequences with motif7479.0
Percentage of Background Sequences with motif16.10%
Average Position of motif in Targets99.6 +/- 59.6bp
Average Position of motif in Background99.2 +/- 66.5bp
Strand Bias (log2 ratio + to - strand density)0.2
Multiplicity (# of sites on avg that occur together)1.37
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

FIGLA/MA0820.1/Jaspar

Match Rank:1
Score:0.79
Offset:-2
Orientation:reverse strand
Alignment:--CAAGTGTT
AACAGGTGNT
 A C G T A C G T A G T C C G T A C T G A A C T G C G A T A C T G C G A T A C G T
G C T A T G C A G T A C G C T A A T C G A T C G C A G T C T A G C A T G C G A T

CLOCK/MA0819.1/Jaspar

Match Rank:2
Score:0.78
Offset:-2
Orientation:reverse strand
Alignment:--CAAGTGTT
AACACGTGTT
 A C G T A C G T A G T C C G T A C T G A A C T G C G A T A C T G C G A T A C G T
C T G A T C G A T G A C T C G A A G T C C T A G A G C T A C T G A G C T G A C T

MF0007.1_bHLH(zip)_class/Jaspar

Match Rank:3
Score:0.78
Offset:0
Orientation:reverse strand
Alignment:CAAGTGTT
CACGTGNT
 A G T C C G T A C T G A A C T G C G A T A C T G C G A T A C G T
G A T C C G T A A T G C T A C G G A C T C T A G A T C G A G C T

TCF3/MA0522.2/Jaspar

Match Rank:4
Score:0.77
Offset:-2
Orientation:reverse strand
Alignment:--CAAGTGTT
NNCAGGTGTN
 A C G T A C G T A G T C C G T A C T G A A C T G C G A T A C T G C G A T A C G T
G T C A T C A G A G T C C G T A A T C G T A C G C G A T A C T G A G C T C A G T

NKX2-3/MA0672.1/Jaspar

Match Rank:5
Score:0.76
Offset:-2
Orientation:reverse strand
Alignment:--CAAGTGTT
NTCAAGTGGN
 A C G T A C G T A G T C C G T A C T G A A C T G C G A T A C T G C G A T A C G T
A G C T G C A T A G T C C T G A G T C A A C T G C G A T C T A G A T C G A C G T

SNAI2/MA0745.1/Jaspar

Match Rank:6
Score:0.75
Offset:-2
Orientation:forward strand
Alignment:--CAAGTGTT
AACAGGTGT-
 A C G T A C G T A G T C C G T A C T G A A C T G C G A T A C T G C G A T A C G T
C T G A C T G A G T A C G C T A C T A G C T A G G A C T C A T G A G C T A C G T

E2A(bHLH),near_PU.1/Bcell-PU.1-ChIP-Seq(GSE21512)/Homer

Match Rank:7
Score:0.74
Offset:-2
Orientation:reverse strand
Alignment:--CAAGTGTT
NNCAGGTGNN
 A C G T A C G T A G T C C G T A C T G A A C T G C G A T A C T G C G A T A C G T
C A G T T A C G A G T C C G T A A C T G A C T G A C G T A C T G A C G T T A C G

ID4/MA0824.1/Jaspar

Match Rank:8
Score:0.74
Offset:-2
Orientation:reverse strand
Alignment:--CAAGTGTT
GACAGGTGTN
 A C G T A C G T A G T C C G T A C T G A A C T G C G A T A C T G C G A T A C G T
C T A G T C G A A G T C C G T A A T C G A T C G A G C T A C T G A G C T G T C A

MAX/MA0058.3/Jaspar

Match Rank:9
Score:0.74
Offset:-2
Orientation:reverse strand
Alignment:--CAAGTGTT
NNCACGTGGT
 A C G T A C G T A G T C C G T A C T G A A C T G C G A T A C T G C G A T A C G T
C T G A T A C G T G A C C T G A A G T C T C A G G A C T A C T G A C T G A C G T

NKX2-8/MA0673.1/Jaspar

Match Rank:10
Score:0.74
Offset:-2
Orientation:reverse strand
Alignment:--CAAGTGTT
NTCAAGTGG-
 A C G T A C G T A G T C C G T A C T G A A C T G C G A T A C T G C G A T A C G T
A G C T C G A T A T G C C T G A C T G A C T A G C A G T C T A G A T C G A C G T