Information for 16-CACACACCACAC (Motif 20)

A G T C G T C A A G T C G C T A T A G C G T C A G T A C G T A C G T C A T G A C T G C A G T A C
Reverse Opposite:
C A T G A C G T A C T G C A G T C A T G C A T G C A G T A T C G C G A T T C A G C A G T T C A G
p-value:1e-7
log p-value:-1.620e+01
Information Content per bp:1.526
Number of Target Sequences with motif36.0
Percentage of Target Sequences with motif5.51%
Number of Background Sequences with motif931.5
Percentage of Background Sequences with motif2.01%
Average Position of motif in Targets99.4 +/- 52.7bp
Average Position of motif in Background101.5 +/- 70.1bp
Strand Bias (log2 ratio + to - strand density)1.5
Multiplicity (# of sites on avg that occur together)2.47
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

PB0208.1_Zscan4_2/Jaspar

Match Rank:1
Score:0.63
Offset:-5
Orientation:forward strand
Alignment:-----CACACACCACAC
CGAAGCACACAAAATA-
 A C G T A C G T A C G T A C G T A C G T A G T C G T C A A G T C G C T A T A G C G T C A G T A C G T A C G T C A T G A C T G C A G T A C
G T A C T A C G G C T A T C G A C T A G T G A C C G T A G T A C C T G A G A T C G C T A G T C A G T C A G C T A G C A T T C G A A C G T

RREB1/MA0073.1/Jaspar

Match Rank:2
Score:0.63
Offset:-1
Orientation:forward strand
Alignment:-CACACACCACAC-------
CCCCAAACCACCCCCCCCCA
 A C G T A G T C G T C A A G T C G C T A T A G C G T C A G T A C G T A C G T C A T G A C T G C A G T A C A C G T A C G T A C G T A C G T A C G T A C G T A C G T
G T A C G T A C G T A C A G T C G T C A G T C A G T C A G T A C A G T C C G T A G T A C G T A C G T A C T G A C G T A C G T A C G T A C G T A C T A G C T G A C

PB0130.1_Gm397_2/Jaspar

Match Rank:3
Score:0.61
Offset:-5
Orientation:forward strand
Alignment:-----CACACACCACAC
AGCGGCACACACGCAA-
 A C G T A C G T A C G T A C G T A C G T A G T C G T C A A G T C G C T A T A G C G T C A G T A C G T A C G T C A T G A C T G C A G T A C
C T G A T C A G G T A C T C A G C T A G T G A C C T G A G A T C T C G A A T G C T G C A G T A C A C T G G A T C T G C A G T C A A C G T

RUNX2(Runt)/PCa-RUNX2-ChIP-Seq(GSE33889)/Homer

Match Rank:4
Score:0.59
Offset:2
Orientation:forward strand
Alignment:CACACACCACAC--
--NWAACCACADNN
 A G T C G T C A A G T C G C T A T A G C G T C A G T A C G T A C G T C A T G A C T G C A G T A C A C G T A C G T
A C G T A C G T T G A C G C T A T C G A T G C A A G T C A G T C C G T A A G T C C G T A C T G A G C T A G T A C

MTF1/MA0863.1/Jaspar

Match Rank:5
Score:0.59
Offset:-4
Orientation:forward strand
Alignment:----CACACACCACAC
TTTGCACACGGCAC--
 A C G T A C G T A C G T A C G T A G T C G T C A A G T C G C T A T A G C G T C A G T A C G T A C G T C A T G A C T G C A G T A C
C A G T A C G T G A C T T C A G G T A C C G T A T A G C G T C A A G T C C A T G C A T G A G T C T G C A G A T C A C G T A C G T

KLF9/MA1107.1/Jaspar

Match Rank:6
Score:0.58
Offset:-3
Orientation:forward strand
Alignment:---CACACACCACAC
GGCCACACCCACC--
 A C G T A C G T A C G T A G T C G T C A A G T C G C T A T A G C G T C A G T A C G T A C G T C A T G A C T G C A G T A C
T C A G T A C G T G A C A T G C T G C A A T G C C T G A A T G C T G A C G A T C G T C A A G T C G A T C A C G T A C G T

KLF10(Zf)/HEK293-KLF10.GFP-ChIP-Seq(GSE58341)/Homer

Match Rank:7
Score:0.58
Offset:-1
Orientation:reverse strand
Alignment:-CACACACCACAC
GGACACACCCCC-
 A C G T A G T C G T C A A G T C G C T A T A G C G T C A G T A C G T A C G T C A T G A C T G C A G T A C
T C A G T A C G G T C A A G T C G T C A A G T C C T G A A G T C G T A C G A T C G T A C A G T C A C G T

RUNX(Runt)/HPC7-Runx1-ChIP-Seq(GSE22178)/Homer

Match Rank:8
Score:0.56
Offset:2
Orientation:forward strand
Alignment:CACACACCACAC
--NAAACCACAG
 A G T C G T C A A G T C G C T A T A G C G T C A G T A C G T A C G T C A T G A C T G C A G T A C
A C G T A C G T T A G C G C T A T C G A C T G A A G T C A G T C C T G A A G T C C G T A C T A G

RUNX-AML(Runt)/CD4+-PolII-ChIP-Seq(Barski_et_al.)/Homer

Match Rank:9
Score:0.55
Offset:3
Orientation:reverse strand
Alignment:CACACACCACAC-
---AAACCACAGC
 A G T C G T C A A G T C G C T A T A G C G T C A G T A C G T A C G T C A T G A C T G C A G T A C A C G T
A C G T A C G T A C G T G C T A T C G A T G C A T G A C G T A C T G C A A G T C C T G A C T A G T G A C

Nkx2-5(var.2)/MA0503.1/Jaspar

Match Rank:10
Score:0.54
Offset:-3
Orientation:forward strand
Alignment:---CACACACCACAC
AGCCACTCAAG----
 A C G T A C G T A C G T A G T C G T C A A G T C G C T A T A G C G T C A G T A C G T A C G T C A T G A C T G C A G T A C
C T G A C T A G T A G C A G T C G C T A A G T C A C G T A G T C G T C A C T G A T A C G A C G T A C G T A C G T A C G T