Information for 16-AVTGATCA (Motif 23)

C T G A T C A G A G C T A T C G C G T A C G A T A G T C C T G A
Reverse Opposite:
G A C T A C T G C G T A G C A T T A G C T C G A A G T C A G C T
p-value:1e-5
log p-value:-1.157e+01
Information Content per bp:1.747
Number of Target Sequences with motif56.0
Percentage of Target Sequences with motif8.58%
Number of Background Sequences with motif2144.7
Percentage of Background Sequences with motif4.62%
Average Position of motif in Targets117.8 +/- 50.1bp
Average Position of motif in Background99.5 +/- 70.0bp
Strand Bias (log2 ratio + to - strand density)0.6
Multiplicity (# of sites on avg that occur together)1.48
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

PH0016.1_Cux1_1/Jaspar

Match Rank:1
Score:0.74
Offset:-3
Orientation:reverse strand
Alignment:---AVTGATCA------
TNAGNTGATCAACCGGT
 A C G T A C G T A C G T C T G A T C A G A G C T A T C G C G T A C G A T A G T C C T G A A C G T A C G T A C G T A C G T A C G T A C G T
G A C T T A G C G C T A A T C G C A T G C G A T C T A G C G T A A G C T G A T C C G T A C T G A A G T C A G T C C T A G T A C G G A C T

PH0017.1_Cux1_2/Jaspar

Match Rank:2
Score:0.72
Offset:-4
Orientation:forward strand
Alignment:----AVTGATCA---
TAATGATGATCACTA
 A C G T A C G T A C G T A C G T C T G A T C A G A G C T A T C G C G T A C G A T A G T C C T G A A C G T A C G T A C G T
C G A T T G C A T C G A A G C T C A T G G C T A C G A T C T A G C G T A C A G T G A T C T C G A G T A C C G A T C G T A

MEOX2/MA0706.1/Jaspar

Match Rank:3
Score:0.64
Offset:0
Orientation:forward strand
Alignment:AVTGATCA--
AGTAATTAAC
 C T G A T C A G A G C T A T C G C G T A C G A T A G T C C T G A A C G T A C G T
C T G A T A C G G A C T T G C A G T C A C A G T A G C T C T G A C G T A T G A C

POL002.1_INR/Jaspar

Match Rank:4
Score:0.64
Offset:5
Orientation:forward strand
Alignment:AVTGATCA-----
-----TCAGTCTT
 C T G A T C A G A G C T A T C G C G T A C G A T A G T C C T G A A C G T A C G T A C G T A C G T A C G T
A C G T A C G T A C G T A C G T A C G T C A G T A G T C C G T A A T C G G A C T G A T C A G C T A G C T

NRL/MA0842.1/Jaspar

Match Rank:5
Score:0.64
Offset:1
Orientation:reverse strand
Alignment:AVTGATCA----
-GTCAGCANNTN
 C T G A T C A G A G C T A T C G C G T A C G A T A G T C C T G A A C G T A C G T A C G T A C G T
A C G T T C A G C G A T G T A C C G T A C A T G A G T C C T G A C G T A C G T A G C A T G C A T

PB0022.1_Gata5_1/Jaspar

Match Rank:6
Score:0.64
Offset:-4
Orientation:reverse strand
Alignment:----AVTGATCA-----
NTNTTCTTATCAGTNTN
 A C G T A C G T A C G T A C G T C T G A T C A G A G C T A T C G C G T A C G A T A G T C C T G A A C G T A C G T A C G T A C G T A C G T
G C T A G C A T G T A C A G C T A G C T A T G C C G A T C G A T C G T A A C G T A G T C C G T A T C A G G A C T G C A T G C A T C G T A

PB0099.1_Zfp691_1/Jaspar

Match Rank:7
Score:0.63
Offset:-5
Orientation:forward strand
Alignment:-----AVTGATCA----
CGAACAGTGCTCACTAT
 A C G T A C G T A C G T A C G T A C G T C T G A T C A G A G C T A T C G C G T A C G A T A G T C C T G A A C G T A C G T A C G T A C G T
A G T C C A T G G C T A T C G A G A T C T C G A A C T G C G A T C T A G G T A C A G C T A G T C T G C A A G T C G C A T C T G A C G A T

GATA5/MA0766.1/Jaspar

Match Rank:8
Score:0.63
Offset:0
Orientation:reverse strand
Alignment:AVTGATCA
TCTTATCT
 C T G A T C A G A G C T A T C G C G T A C G A T A G T C C T G A
A G C T A T G C G A C T C G A T C G T A A G C T A G T C C G A T

MafF(bZIP)/HepG2-MafF-ChIP-Seq(GSE31477)/Homer

Match Rank:9
Score:0.63
Offset:-2
Orientation:forward strand
Alignment:--AVTGATCA-----
HWWGTCAGCAWWTTT
 A C G T A C G T C T G A T C A G A G C T A T C G C G T A C G A T A G T C C T G A A C G T A C G T A C G T A C G T A C G T
G T A C C G T A C G T A T A C G G C A T G T A C C G T A C A T G A G T C C G T A C G T A C G A T G C A T G C A T G A C T

PH0134.1_Pbx1/Jaspar

Match Rank:10
Score:0.63
Offset:-2
Orientation:forward strand
Alignment:--AVTGATCA-------
TCACCCATCAATAAACA
 A C G T A C G T C T G A T C A G A G C T A T C G C G T A C G A T A G T C C T G A A C G T A C G T A C G T A C G T A C G T A C G T A C G T
G A C T A G T C C G T A G A T C G T A C T G A C C T G A C G A T G T A C G T C A G C T A C G A T G T A C G C T A C G A T T G A C T G C A