Information for 20-CCACCTTCGCAC (Motif 25)

A T G C G T A C C G T A A G T C G T A C A C G T A C G T A G T C A T C G A G T C C G T A A G T C
Reverse Opposite:
A C T G A C G T C T A G A T G C A C T G G T C A C G T A A C T G A C T G A C G T A C T G A T C G
p-value:1e-3
log p-value:-7.856e+00
Information Content per bp:1.859
Number of Target Sequences with motif2.0
Percentage of Target Sequences with motif0.31%
Number of Background Sequences with motif2.3
Percentage of Background Sequences with motif0.00%
Average Position of motif in Targets101.5 +/- 57.9bp
Average Position of motif in Background98.3 +/- 25.6bp
Strand Bias (log2 ratio + to - strand density)10.0
Multiplicity (# of sites on avg that occur together)8.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

Slug(Zf)/Mesoderm-Snai2-ChIP-Seq(GSE61475)/Homer

Match Rank:1
Score:0.64
Offset:-2
Orientation:forward strand
Alignment:--CCACCTTCGCAC
SNGCACCTGCHS--
 A C G T A C G T A T G C G T A C C G T A A G T C G T A C A C G T A C G T A G T C A T C G A G T C C G T A A G T C
T A C G C T A G T A C G A G T C C G T A A G T C A G T C A C G T A C T G A G T C G A T C T A G C A C G T A C G T

ZEB1/MA0103.3/Jaspar

Match Rank:2
Score:0.63
Offset:-1
Orientation:forward strand
Alignment:-CCACCTTCGCAC
CCCACCTGCGC--
 A C G T A T G C G T A C C G T A A G T C G T A C A C G T A C G T A G T C A T C G A G T C C G T A A G T C
A T G C A T G C A G T C C T G A A G T C T A G C A G C T T C A G A T G C T A C G A T G C A C G T A C G T

RBPJ/MA1116.1/Jaspar

Match Rank:3
Score:0.60
Offset:3
Orientation:reverse strand
Alignment:CCACCTTCGCAC-
---NNTTCCCANN
 A T G C G T A C C G T A A G T C G T A C A C G T A C G T A G T C A T C G A G T C C G T A A G T C A C G T
A C G T A C G T A C G T A T G C A C G T C A G T G C A T T G A C T G A C A G T C C T G A A T C G T C A G

SNAI2/MA0745.1/Jaspar

Match Rank:4
Score:0.59
Offset:0
Orientation:reverse strand
Alignment:CCACCTTCGCAC
NCACCTGTN---
 A T G C G T A C C G T A A G T C G T A C A C G T A C G T A G T C A T C G A G T C C G T A A G T C
T C G A G T A C C T G A G A T C G A T C C G A T C A T G G A C T G A C T A C G T A C G T A C G T

E2A(bHLH),near_PU.1/Bcell-PU.1-ChIP-Seq(GSE21512)/Homer

Match Rank:5
Score:0.59
Offset:-1
Orientation:forward strand
Alignment:-CCACCTTCGCAC
NNCACCTGNN---
 A C G T A T G C G T A C C G T A A G T C G T A C A C G T A C G T A G T C A T C G A G T C C G T A A G T C
A T G C T G C A A G T C C G T A A G T C A G T C A C G T A C T G A T G C G T C A A C G T A C G T A C G T

Rbpj1(?)/Panc1-Rbpj1-ChIP-Seq(GSE47459)/Homer

Match Rank:6
Score:0.59
Offset:3
Orientation:forward strand
Alignment:CCACCTTCGCAC-
---HTTTCCCASG
 A T G C G T A C C G T A A G T C G T A C A C G T A C G T A G T C A T C G A G T C C G T A A G T C A C G T
A C G T A C G T A C G T G A C T C A G T A G C T C G A T A G T C G A T C A G T C C G T A A T G C T C A G

PB0161.1_Rxra_2/Jaspar

Match Rank:7
Score:0.59
Offset:-4
Orientation:reverse strand
Alignment:----CCACCTTCGCAC
NNNNCAACCTTCGNGA
 A C G T A C G T A C G T A C G T A T G C G T A C C G T A A G T C G T A C A C G T A C G T A G T C A T C G A G T C C G T A A G T C
G T C A C A T G G C A T C T G A A G T C T C G A T G C A T G A C G A T C C G A T C G A T A G T C C A T G A G T C A C T G G T C A

TEAD2/MA1121.1/Jaspar

Match Rank:8
Score:0.59
Offset:0
Orientation:forward strand
Alignment:CCACCTTCGCAC-
TCACATTCCAGCC
 A T G C G T A C C G T A A G T C G T A C A C G T A C G T A G T C A T C G A G T C C G T A A G T C A C G T
G A C T G A T C T C G A T G A C C T G A A G C T C G A T A G T C G A T C G C T A C A T G A T G C T A G C

MYC/MA0147.3/Jaspar

Match Rank:9
Score:0.58
Offset:-2
Orientation:forward strand
Alignment:--CCACCTTCGCAC
GGCCACGTGCCC--
 A C G T A C G T A T G C G T A C C G T A A G T C G T A C A C G T A C G T A G T C A T C G A G T C C G T A A G T C
T A C G T A C G T A G C T G A C C T G A A G T C T C A G A G C T A T C G A T G C A G T C A T G C A C G T A C G T

PRDM1/MA0508.2/Jaspar

Match Rank:10
Score:0.58
Offset:0
Orientation:forward strand
Alignment:CCACCTTCGCAC
TCACTTTCAC--
 A T G C G T A C C G T A A G T C G T A C A C G T A C G T A G T C A T C G A G T C C G T A A G T C
G C A T G A T C T C G A G A T C C A G T C G A T G C A T T G A C G C T A G A T C A C G T A C G T