Information for 9-TCGTTGCAAACG (Motif 4)

A G C T A G T C A C T G A C G T A C G T A C T G A T G C G T C A G T C A C G T A A G T C A T C G
Reverse Opposite:
A T G C C T A G A C G T A C G T A C G T A T C G G T A C G T C A C G T A A G T C A C T G C T G A
p-value:1e-22
log p-value:-5.125e+01
Information Content per bp:1.805
Number of Target Sequences with motif9.0
Percentage of Target Sequences with motif1.38%
Number of Background Sequences with motif1.5
Percentage of Background Sequences with motif0.00%
Average Position of motif in Targets89.5 +/- 46.9bp
Average Position of motif in Background143.0 +/- 23.5bp
Strand Bias (log2 ratio + to - strand density)1.2
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

PB0044.1_Mtf1_1/Jaspar

Match Rank:1
Score:0.62
Offset:0
Orientation:reverse strand
Alignment:TCGTTGCAAACG----
NNTTTGCACACGGCCC
 A G C T A G T C A C T G A C G T A C G T A C T G A T G C G T C A G T C A C G T A A G T C A T C G A C G T A C G T A C G T A C G T
C G A T G A C T C A G T A C G T G A C T A C T G G A T C C T G A A G T C G C T A G A T C A C T G C T A G G A T C T A G C G T A C

CENPB/MA0637.1/Jaspar

Match Rank:2
Score:0.60
Offset:-1
Orientation:reverse strand
Alignment:-TCGTTGCAAACG--
TTCGTNNNANGCGGG
 A C G T A G C T A G T C A C T G A C G T A C G T A C T G A T G C G T C A G T C A C G T A A G T C A T C G A C G T A C G T
C A G T C G A T A G T C C A T G A G C T C G A T A T C G A C G T C T G A G C A T T C A G T G A C C T A G C T A G C T A G

PB0055.1_Rfx4_1/Jaspar

Match Rank:3
Score:0.56
Offset:-1
Orientation:reverse strand
Alignment:-TCGTTGCAAACG--
NNCGTTGCTATGGNN
 A C G T A G C T A G T C A C T G A C G T A C G T A C T G A T G C G T C A G T C A C G T A A G T C A T C G A C G T A C G T
G C T A A G T C A T G C C T A G A G C T G A C T C T A G A G T C A G C T C T G A C A G T T A C G A T C G C A G T T C G A

MTF1/MA0863.1/Jaspar

Match Rank:4
Score:0.54
Offset:2
Orientation:forward strand
Alignment:TCGTTGCAAACG----
--TTTGCACACGGCAC
 A G C T A G T C A C T G A C G T A C G T A C T G A T G C G T C A G T C A C G T A A G T C A T C G A C G T A C G T A C G T A C G T
A C G T A C G T C A G T A C G T G A C T T C A G G T A C C G T A T A G C G T C A A G T C C A T G C A T G A G T C T G C A G A T C

PB0054.1_Rfx3_1/Jaspar

Match Rank:5
Score:0.54
Offset:-5
Orientation:reverse strand
Alignment:-----TCGTTGCAAACG------
NTNNNNNGTTGCTANGGNNCANA
 A C G T A C G T A C G T A C G T A C G T A G C T A G T C A C T G A C G T A C G T A C T G A T G C G T C A G T C A C G T A A G T C A T C G A C G T A C G T A C G T A C G T A C G T A C G T
C G A T C G A T C G T A C G T A G C A T A G T C A T C G C T A G A C G T G A C T C T A G A G T C A G C T C T G A C T G A T A C G A C T G C T A G C A G T T A G C T C G A G T A C C T G A

Rbpj1(?)/Panc1-Rbpj1-ChIP-Seq(GSE47459)/Homer

Match Rank:6
Score:0.54
Offset:1
Orientation:reverse strand
Alignment:TCGTTGCAAACG
-CSTGGGAAAD-
 A G C T A G T C A C T G A C G T A C G T A C T G A T G C G T C A G T C A C G T A A G T C A T C G
A C G T A G T C T A C G C G A T A C T G C T A G A C T G C G T A C T G A G T C A C T G A A C G T

PB0056.1_Rfxdc2_1/Jaspar

Match Rank:7
Score:0.53
Offset:-1
Orientation:reverse strand
Alignment:-TCGTTGCAAACG--
NCCGTTGCTANGNGN
 A C G T A G C T A G T C A C T G A C G T A C G T A C T G A T G C G T C A G T C A C G T A A G T C A T C G A C G T A C G T
G A C T A G T C A T G C C T A G A C G T G A C T C T A G G A T C A G C T C T G A C A G T T A C G A T G C T C A G T C A G

CHR(?)/Hela-CellCycle-Expression/Homer

Match Rank:8
Score:0.53
Offset:0
Orientation:forward strand
Alignment:TCGTTGCAAACG
CGGTTTCAAA--
 A G C T A G T C A C T G A C G T A C G T A C T G A T G C G T C A G T C A C G T A A G T C A T C G
T A G C T C A G C A T G G C A T A G C T C G A T A T G C C G T A C G T A G T C A A C G T A C G T

Rfx1/MA0509.1/Jaspar

Match Rank:9
Score:0.53
Offset:2
Orientation:reverse strand
Alignment:TCGTTGCAAACG----
--GTTGCCATGGNAAC
 A G C T A G T C A C T G A C G T A C G T A C T G A T G C G T C A G T C A C G T A A G T C A T C G A C G T A C G T A C G T A C G T
A C G T A C G T A C T G A G C T G A C T C A T G A G T C A G T C C G T A C G A T C T A G T C A G T G A C C T G A T G C A G A T C

PH0044.1_Homez/Jaspar

Match Rank:10
Score:0.52
Offset:-6
Orientation:forward strand
Alignment:------TCGTTGCAAACG
AAAACATCGTTTTTAAG-
 A C G T A C G T A C G T A C G T A C G T A C G T A G C T A G T C A C T G A C G T A C G T A C T G A T G C G T C A G T C A C G T A A G T C A T C G
C G T A G C A T G C T A G C T A T G A C G C T A A C G T G T A C A C T G C G A T C G A T G C A T G A C T A G C T G C T A C T G A C T A G A C G T