Information for 16-CCTGTACATTAA (Motif 17)

A G T C A G T C A C G T A C T G A C G T C G T A G T A C C G T A A C G T A C G T C G T A C G T A
Reverse Opposite:
A C G T A C G T C G T A C G T A A C G T A C T G A C G T G T C A A G T C C G T A A C T G A C T G
p-value:1e-4
log p-value:-9.344e+00
Information Content per bp:1.956
Number of Target Sequences with motif3.0
Percentage of Target Sequences with motif0.31%
Number of Background Sequences with motif4.7
Percentage of Background Sequences with motif0.01%
Average Position of motif in Targets70.7 +/- 40.0bp
Average Position of motif in Background112.7 +/- 28.0bp
Strand Bias (log2 ratio + to - strand density)2.6
Multiplicity (# of sites on avg that occur together)2.33
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

Arid3a/MA0151.1/Jaspar

Match Rank:1
Score:0.61
Offset:7
Orientation:forward strand
Alignment:CCTGTACATTAA-
-------ATTAAA
 A G T C A G T C A C G T A C T G A C G T C G T A G T A C C G T A A C G T A C G T C G T A C G T A A C G T
A C G T A C G T A C G T A C G T A C G T A C G T A C G T C G T A A C G T G A C T C G T A C G T A C G T A

PH0128.1_Otp/Jaspar

Match Rank:2
Score:0.60
Offset:0
Orientation:reverse strand
Alignment:CCTGTACATTAA-----
CNNATTAATTAATTNNN
 A G T C A G T C A C G T A C T G A C G T C G T A G T A C C G T A A C G T A C G T C G T A C G T A A C G T A C G T A C G T A C G T A C G T
G T A C G T A C G T C A T C G A G A C T G A C T T C G A C T G A A G C T A C G T C T G A C T G A A G C T C G A T C T G A A G T C A C T G

Nkx6.1(Homeobox)/Islet-Nkx6.1-ChIP-Seq(GSE40975)/Homer

Match Rank:3
Score:0.59
Offset:5
Orientation:reverse strand
Alignment:CCTGTACATTAA-
-----YCATTAMC
 A G T C A G T C A C G T A C T G A C G T C G T A G T A C C G T A A C G T A C G T C G T A C G T A A C G T
A C G T A C G T A C G T A C G T A C G T A G C T T G A C C G T A A C G T A C G T C G T A G T C A T G A C

Arid3b/MA0601.1/Jaspar

Match Rank:4
Score:0.58
Offset:4
Orientation:reverse strand
Alignment:CCTGTACATTAA---
----NTAATTAATAT
 A G T C A G T C A C G T A C T G A C G T C G T A G T A C C G T A A C G T A C G T C G T A C G T A A C G T A C G T A C G T
A C G T A C G T A C G T A C G T A C G T A C G T C G T A C G T A C G A T A C G T C G T A C G T A C G A T C G T A A C G T

PH0136.1_Phox2b/Jaspar

Match Rank:5
Score:0.58
Offset:0
Orientation:reverse strand
Alignment:CCTGTACATTAA-----
CNNNTTAATTAATTNNN
 A G T C A G T C A C G T A C T G A C G T C G T A G T A C C G T A A C G T A C G T C G T A C G T A A C G T A C G T A C G T A C G T A C G T
A T G C T A G C G A C T T C G A G A C T G A C T T C G A C G T A G A C T A G C T C T G A C T G A A C G T C A G T T G A C A G T C A T C G

NKX6-2/MA0675.1/Jaspar

Match Rank:6
Score:0.57
Offset:4
Orientation:forward strand
Alignment:CCTGTACATTAA
----CTAATTAA
 A G T C A G T C A C G T A C T G A C G T C G T A G T A C C G T A A C G T A C G T C G T A C G T A
A C G T A C G T A C G T A C G T A T G C G A C T G T C A G C T A C G A T G C A T C T G A G C T A

PH0059.1_Hoxb4/Jaspar

Match Rank:7
Score:0.57
Offset:0
Orientation:forward strand
Alignment:CCTGTACATTAA-----
CGCGTTAATTAATTACC
 A G T C A G T C A C G T A C T G A C G T C G T A G T A C C G T A A C G T A C G T C G T A C G T A A C G T A C G T A C G T A C G T A C G T
T A G C C T A G G T A C C T A G G A C T G A C T G T C A C G T A C G A T A C G T C T G A C T G A A G C T G C A T T G C A G T A C A G T C

PH0173.1_Uncx/Jaspar

Match Rank:8
Score:0.57
Offset:0
Orientation:reverse strand
Alignment:CCTGTACATTAA-----
CNCNTTAATTAATTANN
 A G T C A G T C A C G T A C T G A C G T C G T A G T A C C G T A A C G T A C G T C G T A C G T A A C G T A C G T A C G T A C G T A C G T
T G A C A T C G A G T C T C A G A G C T G A C T T C G A C G T A G A C T A C G T C T G A C T G A A C G T A G C T C G T A A G C T A C T G

PH0069.1_Hoxc4/Jaspar

Match Rank:9
Score:0.56
Offset:0
Orientation:forward strand
Alignment:CCTGTACATTAA-----
CGAATTAATTAACAATA
 A G T C A G T C A C G T A C T G A C G T C G T A G T A C C G T A A C G T A C G T C G T A C G T A A C G T A C G T A C G T A C G T A C G T
T G A C T C A G G T C A C T G A G C A T G A C T G T C A C G T A C G A T A C G T C T G A C G T A A G T C G C T A T G C A G C A T G T C A

HOXB3/MA0903.1/Jaspar

Match Rank:10
Score:0.56
Offset:3
Orientation:forward strand
Alignment:CCTGTACATTAA-
---ACTAATTAGC
 A G T C A G T C A C G T A C T G A C G T C G T A G T A C C G T A A C G T A C G T C G T A C G T A A C G T
A C G T A C G T A C G T C T G A T A G C G A C T T G C A T C G A A G C T G A C T G C T A T C A G T G A C