Information for 2-TCGCCATATTCC (Motif 2)

A C G T A G T C C T A G G T A C G T A C C G T A A C G T C G T A A C G T A C G T A G T C A G T C
Reverse Opposite:
A C T G C T A G C G T A C G T A A C G T C G T A A C G T A C T G A C T G A G T C C T A G C G T A
p-value:1e-22
log p-value:-5.267e+01
Information Content per bp:1.926
Number of Target Sequences with motif11.0
Percentage of Target Sequences with motif1.14%
Number of Background Sequences with motif2.1
Percentage of Background Sequences with motif0.00%
Average Position of motif in Targets110.6 +/- 57.6bp
Average Position of motif in Background39.6 +/- 21.9bp
Strand Bias (log2 ratio + to - strand density)2.1
Multiplicity (# of sites on avg that occur together)1.45
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

YY1/MA0095.2/Jaspar

Match Rank:1
Score:0.67
Offset:-1
Orientation:reverse strand
Alignment:-TCGCCATATTCC
GCNGCCATCTTG-
 A C G T A C G T A G T C C T A G G T A C G T A C C G T A A C G T C G T A A C G T A C G T A G T C A G T C
C A T G A G T C T G A C C A T G A G T C A G T C C T G A A C G T A G T C A G C T G A C T A C T G A C G T

YY1(Zf)/Promoter/Homer

Match Rank:2
Score:0.66
Offset:-1
Orientation:reverse strand
Alignment:-TCGCCATATTCC
GCCGCCATCTTG-
 A C G T A C G T A G T C C T A G G T A C G T A C C G T A A C G T C G T A A C G T A C G T A G T C A G T C
C A T G G A T C A T G C C T A G A G T C A G T C C G T A A C G T A T G C A G C T A C G T A T C G A C G T

Arid5a/MA0602.1/Jaspar

Match Rank:3
Score:0.65
Offset:-2
Orientation:reverse strand
Alignment:--TCGCCATATTCC
NNTNNCAATATTAG
 A C G T A C G T A C G T A G T C C T A G G T A C G T A C C G T A A C G T C G T A A C G T A C G T A G T C A G T C
C G A T G C A T G A C T G C T A A C T G G A T C C T G A C G T A C G A T G C T A G C A T G A C T C T G A A T C G

PB0002.1_Arid5a_1/Jaspar

Match Rank:4
Score:0.65
Offset:-2
Orientation:reverse strand
Alignment:--TCGCCATATTCC
NNTNNCAATATTAG
 A C G T A C G T A C G T A G T C C T A G G T A C G T A C C G T A A C G T C G T A A C G T A C G T A G T C A G T C
C G A T G C A T G A C T G C T A A C T G G A T C C T G A C G T A C G A T G C T A G C A T G A C T C T G A A T C G

NEUROD2/MA0668.1/Jaspar

Match Rank:5
Score:0.64
Offset:2
Orientation:forward strand
Alignment:TCGCCATATTCC
--GCCATATGGT
 A C G T A G T C C T A G G T A C G T A C C G T A A C G T C G T A A C G T A C G T A G T C A G T C
A C G T A C G T T C A G T G A C A T G C C T G A A G C T T G C A A G C T A C T G A C T G G A C T

YY2/MA0748.1/Jaspar

Match Rank:6
Score:0.64
Offset:-2
Orientation:forward strand
Alignment:--TCGCCATATTCC
GTCCGCCATTA---
 A C G T A C G T A C G T A G T C C T A G G T A C G T A C C G T A A C G T C G T A A C G T A C G T A G T C A G T C
C T A G C G A T G A T C A T G C T A C G T G A C A G T C C G T A C G A T G A C T C G T A A C G T A C G T A C G T

TEAD2/MA1121.1/Jaspar

Match Rank:7
Score:0.63
Offset:3
Orientation:forward strand
Alignment:TCGCCATATTCC----
---TCACATTCCAGCC
 A C G T A G T C C T A G G T A C G T A C C G T A A C G T C G T A A C G T A C G T A G T C A G T C A C G T A C G T A C G T A C G T
A C G T A C G T A C G T G A C T G A T C T C G A T G A C C T G A A G C T C G A T A G T C G A T C G C T A C A T G A T G C T A G C

NEUROG2/MA0669.1/Jaspar

Match Rank:8
Score:0.62
Offset:2
Orientation:forward strand
Alignment:TCGCCATATTCC
--AACATATGTC
 A C G T A G T C C T A G G T A C G T A C C G T A A C G T C G T A A C G T A C G T A G T C A G T C
A C G T A C G T T C G A T G C A G A T C C T G A A C G T T G C A G C A T A C T G A G C T A G T C

TEAD1(TEAD)/HepG2-TEAD1-ChIP-Seq(Encode)/Homer

Match Rank:9
Score:0.60
Offset:3
Orientation:forward strand
Alignment:TCGCCATATTCC-
---CYRCATTCCA
 A C G T A G T C C T A G G T A C G T A C C G T A A C G T C G T A A C G T A C G T A G T C A G T C A C G T
A C G T A C G T A C G T T G A C A G T C C T G A T G A C C G T A A C G T A C G T A G T C A G T C C G T A

Neurog1/MA0623.1/Jaspar

Match Rank:10
Score:0.60
Offset:2
Orientation:reverse strand
Alignment:TCGCCATATTCC
--ACCATATGGT
 A C G T A G T C C T A G G T A C G T A C C G T A A C G T C G T A A C G T A C G T A G T C A G T C
A C G T A C G T T C G A T G A C G T A C C T G A A C G T T G C A G A C T A C T G A T C G G A C T