Information for 10-AYGCACGC (Motif 20)

T G C A G A C T C T A G A T G C T G C A G A T C T C A G G A T C
Reverse Opposite:
C T A G A G T C C T A G A C G T T A C G G A T C C T G A A C G T
p-value:1e-3
log p-value:-8.364e+00
Information Content per bp:1.607
Number of Target Sequences with motif49.0
Percentage of Target Sequences with motif5.06%
Number of Background Sequences with motif1381.1
Percentage of Background Sequences with motif2.94%
Average Position of motif in Targets95.5 +/- 60.4bp
Average Position of motif in Background98.5 +/- 72.3bp
Strand Bias (log2 ratio + to - strand density)-0.3
Multiplicity (# of sites on avg that occur together)1.22
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

Ahr::Arnt/MA0006.1/Jaspar

Match Rank:1
Score:0.79
Offset:3
Orientation:reverse strand
Alignment:AYGCACGC-
---CACGCA
 T G C A G A C T C T A G A T G C T G C A G A T C T C A G G A T C A C G T
A C G T A C G T A C G T A G T C C G T A G T A C C T A G G T A C C T G A

Arnt:Ahr(bHLH)/MCF7-Arnt-ChIP-Seq(Lo_et_al.)/Homer

Match Rank:2
Score:0.76
Offset:0
Orientation:forward strand
Alignment:AYGCACGC--
TBGCACGCAA
 T G C A G A C T C T A G A T G C T G C A G A T C T C A G G A T C A C G T A C G T
G C A T A T C G C A T G G T A C G C T A A G T C T C A G T G A C G T C A T G C A

Hes1/MA1099.1/Jaspar

Match Rank:3
Score:0.69
Offset:1
Orientation:forward strand
Alignment:AYGCACGC---
-GGCACGCGTC
 T G C A G A C T C T A G A T G C T G C A G A T C T C A G G A T C A C G T A C G T A C G T
A C G T T A C G T A C G G A T C C T G A A G T C T C A G G A T C A C T G G A C T G T A C

PB0044.1_Mtf1_1/Jaspar

Match Rank:4
Score:0.64
Offset:-3
Orientation:reverse strand
Alignment:---AYGCACGC-----
NNTTTGCACACGGCCC
 A C G T A C G T A C G T T G C A G A C T C T A G A T G C T G C A G A T C T C A G G A T C A C G T A C G T A C G T A C G T A C G T
C G A T G A C T C A G T A C G T G A C T A C T G G A T C C T G A A G T C G C T A G A T C A C T G C T A G G A T C T A G C G T A C

ARNT::HIF1A/MA0259.1/Jaspar

Match Rank:5
Score:0.64
Offset:2
Orientation:reverse strand
Alignment:AYGCACGC--
--GCACGTNC
 T G C A G A C T C T A G A T G C T G C A G A T C T C A G G A T C A C G T A C G T
A C G T A C G T A T C G A G T C C G T A A G T C C T A G A G C T T G A C A T G C

PB0130.1_Gm397_2/Jaspar

Match Rank:6
Score:0.64
Offset:-2
Orientation:forward strand
Alignment:--AYGCACGC------
AGCGGCACACACGCAA
 A C G T A C G T T G C A G A C T C T A G A T G C T G C A G A T C T C A G G A T C A C G T A C G T A C G T A C G T A C G T A C G T
C T G A T C A G G T A C T C A G C T A G T G A C C T G A G A T C T C G A A T G C T G C A G T A C A C T G G A T C T G C A G T C A

HIF-1b(HLH)/T47D-HIF1b-ChIP-Seq(GSE59937)/Homer

Match Rank:7
Score:0.64
Offset:2
Orientation:reverse strand
Alignment:AYGCACGC--
--GCACGTAY
 T G C A G A C T C T A G A T G C T G C A G A T C T C A G G A T C A C G T A C G T
A C G T A C G T C A T G T A G C C T G A G A T C C T A G G A C T G T C A A G C T

PB0095.1_Zfp161_1/Jaspar

Match Rank:8
Score:0.62
Offset:-4
Orientation:reverse strand
Alignment:----AYGCACGC----
NCANGCGCGCGCGCCA
 A C G T A C G T A C G T A C G T T G C A G A C T C T A G A T G C T G C A G A T C T C A G G A T C A C G T A C G T A C G T A C G T
G C A T G A T C C T G A C T A G C T A G G A T C T C A G G A T C C T A G A G T C C T A G A G T C T A C G G A T C G A T C G T C A

POL006.1_BREu/Jaspar

Match Rank:9
Score:0.61
Offset:1
Orientation:forward strand
Alignment:AYGCACGC-
-AGCGCGCC
 T G C A G A C T C T A G A T G C T G C A G A T C T C A G G A T C A C G T
A C G T T G C A T A C G T A G C T C A G T G A C A C T G A G T C A G T C

PB0208.1_Zscan4_2/Jaspar

Match Rank:10
Score:0.61
Offset:-2
Orientation:forward strand
Alignment:--AYGCACGC------
CGAAGCACACAAAATA
 A C G T A C G T T G C A G A C T C T A G A T G C T G C A G A T C T C A G G A T C A C G T A C G T A C G T A C G T A C G T A C G T
G T A C T A C G G C T A T C G A C T A G T G A C C G T A G T A C C T G A G A T C G C T A G T C A G T C A G C T A G C A T T C G A