Information for 11-CTCAGTAA (Motif 24)

A G T C C G A T A G T C C G T A A C T G A C G T C G T A C G T A
Reverse Opposite:
A C G T A C G T C G T A A G T C A C G T A C T G C G T A A C T G
p-value:1e-2
log p-value:-5.392e+00
Information Content per bp:1.951
Number of Target Sequences with motif28.0
Percentage of Target Sequences with motif2.89%
Number of Background Sequences with motif787.9
Percentage of Background Sequences with motif1.68%
Average Position of motif in Targets99.3 +/- 53.9bp
Average Position of motif in Background99.2 +/- 55.4bp
Strand Bias (log2 ratio + to - strand density)-0.9
Multiplicity (# of sites on avg that occur together)1.54
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

PH0151.1_Pou6f1_1/Jaspar

Match Rank:1
Score:0.68
Offset:-5
Orientation:reverse strand
Alignment:-----CTCAGTAA----
NNNACCTCATTATCNTN
 A C G T A C G T A C G T A C G T A C G T A G T C C G A T A G T C C G T A A C T G A C G T C G T A C G T A A C G T A C G T A C G T A C G T
C A T G G A T C G T C A C G T A T A C G G T A C A C G T G T A C C G T A C G A T C G A T C G T A C G A T A T G C A C T G C G A T A G T C

POU6F2/MA0793.1/Jaspar

Match Rank:2
Score:0.68
Offset:-2
Orientation:forward strand
Alignment:--CTCAGTAA
AGCTCATTAT
 A C G T A C G T A G T C C G A T A G T C C G T A A C T G A C G T C G T A C G T A
C T G A T A C G G A T C C A G T G T A C G T C A A G C T A C G T G C T A G C A T

PH0152.1_Pou6f1_2/Jaspar

Match Rank:3
Score:0.64
Offset:-5
Orientation:reverse strand
Alignment:-----CTCAGTAA----
GCAACCTCATTATNNNN
 A C G T A C G T A C G T A C G T A C G T A G T C C G A T A G T C C G T A A C T G A C G T C G T A C G T A A C G T A C G T A C G T A C G T
C A T G G T A C G T C A C G T A A T G C G T A C A C G T G T A C C G T A A C G T C G A T C G T A C G A T A T C G C G A T C A G T A G C T

EWS:FLI1-fusion(ETS)/SK_N_MC-EWS:FLI1-ChIP-Seq(SRA014231)/Homer

Match Rank:4
Score:0.63
Offset:0
Orientation:forward strand
Alignment:CTCAGTAA--
NACAGGAAAT
 A G T C C G A T A G T C C G T A A C T G A C G T C G T A C G T A A C G T A C G T
T G C A C T G A A G T C G T C A A C T G A C T G C G T A C G T A C T G A A G C T

PH0150.1_Pou4f3/Jaspar

Match Rank:5
Score:0.62
Offset:-3
Orientation:reverse strand
Alignment:---CTCAGTAA-----
GACNTCATTAATAANN
 A C G T A C G T A C G T A G T C C G A T A G T C C G T A A C T G A C G T C G T A C G T A A C G T A C G T A C G T A C G T A C G T
C T A G C T G A T G A C G A T C C A G T G T A C C G T A C G A T C G A T C G T A C T G A C G A T C G T A G T C A A G T C C G A T

Foxa2/MA0047.2/Jaspar

Match Rank:6
Score:0.62
Offset:-1
Orientation:reverse strand
Alignment:-CTCAGTAA---
NCTAAGTAAACA
 A C G T A G T C C G A T A G T C C G T A A C T G A C G T C G T A C G T A A C G T A C G T A C G T
T A G C G T A C G C A T T C G A C G T A C T A G A G C T G T C A T G C A C G T A A G T C C G T A

ERG(ETS)/VCaP-ERG-ChIP-Seq(GSE14097)/Homer

Match Rank:7
Score:0.62
Offset:1
Orientation:forward strand
Alignment:CTCAGTAA---
-ACAGGAAGTG
 A G T C C G A T A G T C C G T A A C T G A C G T C G T A C G T A A C G T A C G T A C G T
A C G T T C G A T A G C G T C A A C T G A C T G C G T A C G T A C T A G A G C T T C A G

EWS:ERG-fusion(ETS)/CADO_ES1-EWS:ERG-ChIP-Seq(SRA014231)/Homer

Match Rank:8
Score:0.62
Offset:0
Orientation:reverse strand
Alignment:CTCAGTAA--
NACAGGAAAT
 A G T C C G A T A G T C C G T A A C T G A C G T C G T A C G T A A C G T A C G T
T A G C C T G A T A G C G T C A A C T G A C T G C G T A C G T A C T G A A G C T

POL009.1_DCE_S_II/Jaspar

Match Rank:9
Score:0.61
Offset:0
Orientation:reverse strand
Alignment:CTCAGTAA
CACAGN--
 A G T C C G A T A G T C C G T A A C T G A C G T C G T A C G T A
T A G C C T G A T A G C G T C A A C T G A T G C A C G T A C G T

PB0197.1_Zfp105_2/Jaspar

Match Rank:10
Score:0.61
Offset:-4
Orientation:forward strand
Alignment:----CTCAGTAA-----
ATGGTTCAATAATTTTG
 A C G T A C G T A C G T A C G T A G T C C G A T A G T C C G T A A C T G A C G T C G T A C G T A A C G T A C G T A C G T A C G T A C G T
C T A G A G C T C A T G T A C G A C G T A G C T T G A C T G C A T G C A A G C T T C G A C G T A A G C T C A G T A G C T A C G T C T A G