Information for 23-RCTTMCTTAC (Motif 27)

C T G A A G T C A C G T A C G T G T A C A G T C A C G T A C G T C G T A A G T C
Reverse Opposite:
A C T G A C G T C G T A C G T A C T A G A C T G G T C A C G T A A C T G A G C T
p-value:1e-1
log p-value:-3.809e+00
Information Content per bp:1.855
Number of Target Sequences with motif6.0
Percentage of Target Sequences with motif0.62%
Number of Background Sequences with motif104.8
Percentage of Background Sequences with motif0.22%
Average Position of motif in Targets134.2 +/- 56.3bp
Average Position of motif in Background112.1 +/- 53.5bp
Strand Bias (log2 ratio + to - strand density)-1.4
Multiplicity (# of sites on avg that occur together)2.67
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

FOXK1/MA0852.2/Jaspar

Match Rank:1
Score:0.66
Offset:-1
Orientation:reverse strand
Alignment:-RCTTMCTTAC---
NNCTTGTTTACNNN
 A C G T C T G A A G T C A C G T A C G T G T A C A G T C A C G T A C G T C G T A A G T C A C G T A C G T A C G T
A C T G A T G C A T G C A G C T C A G T T C A G C A G T A C G T A C G T G C T A A G T C G T C A G A C T G C A T

SD0001.1_at_AC_acceptor/Jaspar

Match Rank:2
Score:0.65
Offset:2
Orientation:reverse strand
Alignment:RCTTMCTTAC---
--NNACTTACCTN
 C T G A A G T C A C G T A C G T G T A C A G T C A C G T A C G T C G T A A G T C A C G T A C G T A C G T
A C G T A C G T C T G A G A C T G C T A G A T C G C A T G A C T C G T A A G T C G A T C G C A T A C T G

FOXO3/MA0157.2/Jaspar

Match Rank:3
Score:0.64
Offset:2
Orientation:reverse strand
Alignment:RCTTMCTTAC
--TTGTTTAC
 C T G A A G T C A C G T A C G T G T A C A G T C A C G T A C G T C G T A A G T C
A C G T A C G T G C A T A C G T C A T G A C G T A C G T A C G T G T C A A G T C

PB0015.1_Foxa2_1/Jaspar

Match Rank:4
Score:0.63
Offset:-2
Orientation:reverse strand
Alignment:--RCTTMCTTAC-----
NNNTTTGTTTACTTTTN
 A C G T A C G T C T G A A G T C A C G T A C G T G T A C A G T C A C G T A C G T C G T A A G T C A C G T A C G T A C G T A C G T A C G T
T A C G G A C T A T G C C G A T C G A T C G A T C T A G C G A T C A G T C A G T C T G A A G T C G C A T G C A T C G A T C G A T C G A T

PB0159.1_Rfx4_2/Jaspar

Match Rank:5
Score:0.63
Offset:-2
Orientation:forward strand
Alignment:--RCTTMCTTAC---
TACCCTAGTTACCGA
 A C G T A C G T C T G A A G T C A C G T A C G T G T A C A G T C A C G T A C G T C G T A A G T C A C G T A C G T A C G T
G C A T G T C A A T G C A T G C G T A C C A G T T C G A A C T G C G A T A C G T C G T A A G T C T A G C T A C G G T C A

Foxa2(Forkhead)/Liver-Foxa2-ChIP-Seq(GSE25694)/Homer

Match Rank:6
Score:0.62
Offset:1
Orientation:forward strand
Alignment:RCTTMCTTAC---
-CNTGTTTACATA
 C T G A A G T C A C G T A C G T G T A C A G T C A C G T A C G T C G T A A G T C A C G T A C G T A C G T
A C G T A T G C G A C T A C G T C T A G A C G T A C G T A C G T C T G A G A T C G C T A A G C T C G T A

FOXD1/MA0031.1/Jaspar

Match Rank:7
Score:0.62
Offset:2
Orientation:reverse strand
Alignment:RCTTMCTTAC
--ATGTTTAC
 C T G A A G T C A C G T A C G T G T A C A G T C A C G T A C G T C G T A A G T C
A C G T A C G T G C T A A C G T C A T G A C G T A C G T A C G T C G T A A G T C

FOXP1(Forkhead)/H9-FOXP1-ChIP-Seq(GSE31006)/Homer

Match Rank:8
Score:0.61
Offset:0
Orientation:forward strand
Alignment:RCTTMCTTAC--
NYYTGTTTACHN
 C T G A A G T C A C G T A C G T G T A C A G T C A C G T A C G T C G T A A G T C A C G T A C G T
A G C T A G T C A G T C A C G T C T A G A C G T A C G T A C G T C G T A A G T C G A T C C G T A

FOXK2(Forkhead)/U2OS-FOXK2-ChIP-Seq(E-MTAB-2204)/Homer

Match Rank:9
Score:0.61
Offset:0
Orientation:forward strand
Alignment:RCTTMCTTAC--
SCHTGTTTACAT
 C T G A A G T C A C G T A C G T G T A C A G T C A C G T A C G T C G T A A G T C A C G T A C G T
T A C G T A G C G C T A C G A T C T A G A C G T C A G T C A G T G C T A A G T C G T C A G C A T

FOXI1/MA0042.2/Jaspar

Match Rank:10
Score:0.60
Offset:3
Orientation:reverse strand
Alignment:RCTTMCTTAC
---TGTTTAC
 C T G A A G T C A C G T A C G T G T A C A G T C A C G T A C G T C G T A A G T C
A C G T A C G T A C G T A G C T C T A G G C A T A C G T A C G T C G T A A G T C