Information for 4-TTTTCAGTGATT (Motif 4)

A C G T A C G T A C G T A C G T A G T C G T C A A C T G A C G T A C T G C G T A A C G T A C G T
Reverse Opposite:
G T C A C G T A A C G T A G T C C G T A A G T C A C G T C T A G C G T A C G T A C G T A C G T A
p-value:1e-20
log p-value:-4.742e+01
Information Content per bp:1.948
Number of Target Sequences with motif12.0
Percentage of Target Sequences with motif1.24%
Number of Background Sequences with motif5.7
Percentage of Background Sequences with motif0.01%
Average Position of motif in Targets92.1 +/- 52.5bp
Average Position of motif in Background90.4 +/- 52.3bp
Strand Bias (log2 ratio + to - strand density)2.0
Multiplicity (# of sites on avg that occur together)1.11
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

Gfi1/MA0038.1/Jaspar

Match Rank:1
Score:0.70
Offset:4
Orientation:reverse strand
Alignment:TTTTCAGTGATT--
----CNGTGATTTN
 A C G T A C G T A C G T A C G T A G T C G T C A A C T G A C G T A C T G C G T A A C G T A C G T A C G T A C G T
A C G T A C G T A C G T A C G T A T G C C G T A A T C G C G A T A C T G G C T A A C G T A C G T A C G T C T A G

PB0195.1_Zbtb3_2/Jaspar

Match Rank:2
Score:0.68
Offset:-3
Orientation:reverse strand
Alignment:---TTTTCAGTGATT-
NNNNTGCCAGTGATTG
 A C G T A C G T A C G T A C G T A C G T A C G T A C G T A G T C G T C A A C T G A C G T A C T G C G T A A C G T A C G T A C G T
G C T A G C A T C G A T G A T C G A C T T C A G T G A C T A G C C G T A A C T G A G C T C A T G C G T A A G C T C G A T T C A G

Gfi1b/MA0483.1/Jaspar

Match Rank:3
Score:0.66
Offset:2
Orientation:reverse strand
Alignment:TTTTCAGTGATT-
--TGCTGTGATTT
 A C G T A C G T A C G T A C G T A G T C G T C A A C T G A C G T A C T G C G T A A C G T A C G T A C G T
A C G T A C G T C G A T C T A G G A T C G C A T A T C G C G A T A C T G T C G A A G C T A C G T A C G T

Gfi1b(Zf)/HPC7-Gfi1b-ChIP-Seq(GSE22178)/Homer

Match Rank:4
Score:0.66
Offset:3
Orientation:reverse strand
Alignment:TTTTCAGTGATT-
---GCAGTGATTT
 A C G T A C G T A C G T A C G T A G T C G T C A A C T G A C G T A C T G C G T A A C G T A C G T A C G T
A C G T A C G T A C G T C T A G A G T C G C T A A T C G C G A T A C T G T C G A A C G T A C G T A C G T

Hoxd12(Homeobox)/ChickenMSG-Hoxd12.Flag-ChIP-Seq(GSE86088)/Homer

Match Rank:5
Score:0.64
Offset:0
Orientation:reverse strand
Alignment:TTTTCAGTGATT
NTTTCATTRCHD
 A C G T A C G T A C G T A C G T A G T C G T C A A C T G A C G T A C T G C G T A A C G T A C G T
C G A T G C A T A C G T C G A T A G T C C G T A A C G T A C G T C T A G A G T C G A C T C A G T

PB0005.1_Bbx_1/Jaspar

Match Rank:6
Score:0.63
Offset:-1
Orientation:reverse strand
Alignment:-TTTTCAGTGATT--
NANTTCATTGAATTA
 A C G T A C G T A C G T A C G T A C G T A G T C G T C A A C T G A C G T A C T G C G T A A C G T A C G T A C G T A C G T
G A T C C G T A T A G C C G A T C G A T T G A C G C T A G C A T C G A T A C T G C G T A G C T A G A C T C G A T C G T A

ZSCAN4/MA1155.1/Jaspar

Match Rank:7
Score:0.61
Offset:0
Orientation:reverse strand
Alignment:TTTTCAGTGATT---
TTTTCAGTGTGTGCA
 A C G T A C G T A C G T A C G T A G T C G T C A A C T G A C G T A C T G C G T A A C G T A C G T A C G T A C G T A C G T
G A C T G A C T C A G T G C A T T G A C T G C A C A T G A C G T C T A G G A C T A C T G C G A T A T C G A G T C C T G A

Nkx3.1(Homeobox)/LNCaP-Nkx3.1-ChIP-Seq(GSE28264)/Homer

Match Rank:8
Score:0.61
Offset:2
Orientation:reverse strand
Alignment:TTTTCAGTGATT
--TTAAGTGCTT
 A C G T A C G T A C G T A C G T A G T C G T C A A C T G A C G T A C T G C G T A A C G T A C G T
A C G T A C G T A C G T C A G T T C G A C G T A A C T G A C G T C T A G A T G C A G C T A G C T

PH0004.1_Nkx3-2/Jaspar

Match Rank:9
Score:0.60
Offset:-2
Orientation:reverse strand
Alignment:--TTTTCAGTGATT---
NTNNTTAAGTGGTTANN
 A C G T A C G T A C G T A C G T A C G T A C G T A G T C G T C A A C T G A C G T A C T G C G T A A C G T A C G T A C G T A C G T A C G T
C T A G C A G T A C G T A T C G G C A T C G A T C T G A C T G A A C T G C G A T C T A G A T C G C G A T A G C T C G T A C G A T A C T G

PH0037.1_Hdx/Jaspar

Match Rank:10
Score:0.59
Offset:2
Orientation:reverse strand
Alignment:TTTTCAGTGATT-------
--TNNNATGATTTCNNCNN
 A C G T A C G T A C G T A C G T A G T C G T C A A C T G A C G T A C T G C G T A A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T
A C G T A C G T A C G T C A T G T A G C C T A G C T G A C G A T A T C G G T C A G C A T G C A T A C G T G A T C C A T G G T A C T G A C G A C T G C A T