Information for 11-CCTCTGCCTCTG (Motif 9)

A T G C G T A C A C G T A G T C A C G T A C T G A G T C G T A C A G C T A T G C A G C T A C T G
Reverse Opposite:
A G T C C T G A A T C G C T G A A C T G C T A G G T A C C G T A A C T G C G T A A C T G A T C G
p-value:1e-7
log p-value:-1.613e+01
Information Content per bp:1.870
Number of Target Sequences with motif19.0
Percentage of Target Sequences with motif1.96%
Number of Background Sequences with motif204.2
Percentage of Background Sequences with motif0.43%
Average Position of motif in Targets86.8 +/- 53.3bp
Average Position of motif in Background89.8 +/- 70.2bp
Strand Bias (log2 ratio + to - strand density)2.0
Multiplicity (# of sites on avg that occur together)3.16
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

ZNF519(Zf)/HEK293-ZNF519.GFP-ChIP-Seq(GSE58341)/Homer

Match Rank:1
Score:0.61
Offset:0
Orientation:reverse strand
Alignment:CCTCTGCCTCTG
GCTCGGSCTC--
 A T G C G T A C A C G T A G T C A C G T A C T G A G T C G T A C A G C T A T G C A G C T A C T G
C T A G G T A C A C G T A T G C C T A G A C T G T A C G A G T C A C G T A G T C A C G T A C G T

PU.1(ETS)/ThioMac-PU.1-ChIP-Seq(GSE21512)/Homer

Match Rank:2
Score:0.59
Offset:1
Orientation:reverse strand
Alignment:CCTCTGCCTCTG
-CACTTCCTCT-
 A T G C G T A C A C G T A G T C A C G T A C T G A G T C G T A C A G C T A T G C A G C T A C T G
A C G T A T G C C T G A A T G C C G A T A C G T A G T C A G T C A G C T A T G C G C A T A C G T

Pparg::Rxra/MA0065.2/Jaspar

Match Rank:3
Score:0.59
Offset:-3
Orientation:reverse strand
Alignment:---CCTCTGCCTCTG
TGACCTTTGCCCTAN
 A C G T A C G T A C G T A T G C G T A C A C G T A G T C A C G T A C T G A G T C G T A C A G C T A T G C A G C T A C T G
C G A T T A C G T G C A G T A C G A T C G A C T A G C T A C G T A T C G G T A C G A T C G A T C G A C T T C G A T A G C

PB0193.1_Tcfe2a_2/Jaspar

Match Rank:4
Score:0.59
Offset:-6
Orientation:reverse strand
Alignment:------CCTCTGCCTCTG
CCNNACCATCTGGCCTN-
 A C G T A C G T A C G T A C G T A C G T A C G T A T G C G T A C A C G T A G T C A C G T A C T G A G T C G T A C A G C T A T G C A G C T A C T G
A G T C T A G C T A C G C T A G T C G A G T A C A G T C C G T A A G C T T G A C A G C T C A T G A T C G G T A C G A T C A G C T C A G T A C G T

PPARE(NR),DR1/3T3L1-Pparg-ChIP-Seq(GSE13511)/Homer

Match Rank:5
Score:0.58
Offset:-3
Orientation:forward strand
Alignment:---CCTCTGCCTCTG
TGACCTTTGCCCCA-
 A C G T A C G T A C G T A T G C G T A C A C G T A G T C A C G T A C T G A G T C G T A C A G C T A T G C A G C T A C T G
C G A T T A C G T G C A G T A C G A T C G A C T A G C T A C G T A T C G G T A C G A T C G T A C G A T C G T C A A C G T

NEUROD1/MA1109.1/Jaspar

Match Rank:6
Score:0.58
Offset:-4
Orientation:reverse strand
Alignment:----CCTCTGCCTCTG
NNNCCATCTGTNN---
 A C G T A C G T A C G T A C G T A T G C G T A C A C G T A G T C A C G T A C T G A G T C G T A C A G C T A T G C A G C T A C T G
A T G C A G C T T C A G T G A C G T A C C G T A A C G T T G A C G C A T A C T G A G C T A G T C G T A C A C G T A C G T A C G T

PPARa(NR),DR1/Liver-Ppara-ChIP-Seq(GSE47954)/Homer

Match Rank:7
Score:0.57
Offset:-3
Orientation:reverse strand
Alignment:---CCTCTGCCTCTG
TGACCTTTGMCCTNB
 A C G T A C G T A C G T A T G C G T A C A C G T A G T C A C G T A C T G A G T C G T A C A G C T A T G C A G C T A C T G
G C A T T C A G T G C A G T A C G A T C A G C T A G C T A C G T T A C G T G C A G A T C G A T C G A C T G C T A A C T G

RXR(NR),DR1/3T3L1-RXR-ChIP-Seq(GSE13511)/Homer

Match Rank:8
Score:0.57
Offset:-3
Orientation:reverse strand
Alignment:---CCTCTGCCTCTG
TGACCTTTGCCCTA-
 A C G T A C G T A C G T A T G C G T A C A C G T A G T C A C G T A C T G A G T C G T A C A G C T A T G C A G C T A C T G
A G C T T A C G T G C A G T A C G A T C G A C T A G C T A C G T A T C G T G A C G A T C G A T C G A C T T C G A A C G T

NR2C2/MA0504.1/Jaspar

Match Rank:9
Score:0.56
Offset:-3
Orientation:reverse strand
Alignment:---CCTCTGCCTCTG
TGACCTCTGACCCCN
 A C G T A C G T A C G T A T G C G T A C A C G T A G T C A C G T A C T G A G T C G T A C A G C T A T G C A G C T A C T G
G A C T T C A G T G C A G T A C A G T C A G C T A G T C G A C T T A C G G T C A G T A C T G A C A G T C A G T C A C G T

NeuroG2(bHLH)/Fibroblast-NeuroG2-ChIP-Seq(GSE75910)/Homer

Match Rank:10
Score:0.55
Offset:-2
Orientation:forward strand
Alignment:--CCTCTGCCTCTG
ACCATCTGTT----
 A C G T A C G T A T G C G T A C A C G T A G T C A C G T A C T G A G T C G T A C A G C T A T G C A G C T A C T G
T C G A T G A C G T A C C G T A C A G T T G A C A C G T A C T G A G C T A G C T A C G T A C G T A C G T A C G T