Information for 9-GCGCTAGTAGCA (Motif 10)

A C T G A G T C A C T G A G T C A C G T C G T A A T C G A G C T C G T A A C T G A G T C C T G A
Reverse Opposite:
A G C T A C T G A G T C A C G T C T G A A T G C A C G T C G T A C T A G A G T C C T A G A G T C
p-value:1e-8
log p-value:-1.924e+01
Information Content per bp:1.872
Number of Target Sequences with motif3.0
Percentage of Target Sequences with motif2.21%
Number of Background Sequences with motif0.0
Percentage of Background Sequences with motif0.00%
Average Position of motif in Targets124.6 +/- 45.9bp
Average Position of motif in Background0.0 +/- 0.0bp
Strand Bias (log2 ratio + to - strand density)-0.6
Multiplicity (# of sites on avg that occur together)1.33
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

PB0155.1_Osr2_2/Jaspar

Match Rank:1
Score:0.69
Offset:-1
Orientation:reverse strand
Alignment:-GCGCTAGTAGCA---
NNTGTAGGTAGCANNT
 A C G T A C T G A G T C A C T G A G T C A C G T C G T A A T C G A G C T C G T A A C T G A G T C C T G A A C G T A C G T A C G T
A C T G C T A G C G A T C A T G A G C T C G T A C T A G A C T G C G A T C T G A T A C G A G T C C T G A C T G A C T A G G A C T

PB0154.1_Osr1_2/Jaspar

Match Rank:2
Score:0.67
Offset:-1
Orientation:reverse strand
Alignment:-GCGCTAGTAGCA---
NNNTTAGGTAGCNTNT
 A C G T A C T G A G T C A C T G A G T C A C G T C G T A A T C G A G C T C G T A A C T G A G T C C T G A A C G T A C G T A C G T
A C T G C A G T G C T A C A G T A G C T C G T A C T A G A C T G C G A T C T G A C T A G A G T C C T G A C G A T C T A G G A C T

PRDM9(Zf)/Testis-DMC1-ChIP-Seq(GSE35498)/Homer

Match Rank:3
Score:0.59
Offset:0
Orientation:forward strand
Alignment:GCGCTAGTAGCA---
ADGGYAGYAGCATCT
 A C T G A G T C A C T G A G T C A C G T C G T A A T C G A G C T C G T A A C T G A G T C C T G A A C G T A C G T A C G T
C T G A C G A T C T A G T C A G G A T C C T G A T C A G G A T C C T G A A C T G A G T C G C T A A C G T A G T C G C A T

POL010.1_DCE_S_III/Jaspar

Match Rank:4
Score:0.53
Offset:7
Orientation:forward strand
Alignment:GCGCTAGTAGCA
-------CAGCC
 A C T G A G T C A C T G A G T C A C G T C G T A A T C G A G C T C G T A A C T G A G T C C T G A
A C G T A C G T A C G T A C G T A C G T A C G T A C G T T A G C C G T A A C T G A G T C A T G C

PB0050.1_Osr1_1/Jaspar

Match Rank:5
Score:0.52
Offset:-1
Orientation:forward strand
Alignment:-GCGCTAGTAGCA---
ATTTACAGTAGCAAAA
 A C G T A C T G A G T C A C T G A G T C A C G T C G T A A T C G A G C T C G T A A C T G A G T C C T G A A C G T A C G T A C G T
G C A T G C A T C G A T G C A T G T C A G A T C C T G A A C T G C G A T C T G A C T A G A G T C G C T A T G C A G C T A C T G A

ZNF415(Zf)/HEK293-ZNF415.GFP-ChIP-Seq(GSE58341)/Homer

Match Rank:6
Score:0.51
Offset:-1
Orientation:reverse strand
Alignment:-GCGCTAGTAGCA
GGCTCYAKCAYC-
 A C G T A C T G A G T C A C T G A G T C A C G T C G T A A T C G A G C T C G T A A C T G A G T C C T G A
C A T G A C T G A G T C A C G T A G T C G A T C C G T A A C T G T A G C C T G A A G C T T A G C A C G T

PB0051.1_Osr2_1/Jaspar

Match Rank:7
Score:0.49
Offset:-1
Orientation:forward strand
Alignment:-GCGCTAGTAGCA---
ATGTACAGTAGCAAAG
 A C G T A C T G A G T C A C T G A G T C A C G T C G T A A T C G A G C T C G T A A C T G A G T C C T G A A C G T A C G T A C G T
G C A T C G A T T C A G G C A T G T C A G A T C C T G A A C T G C G A T C T G A A C T G A G T C G C T A G T C A G C T A C T A G

Rfx5(HTH)/GM12878-Rfx5-ChIP-Seq(GSE31477)/Homer

Match Rank:8
Score:0.48
Offset:1
Orientation:forward strand
Alignment:GCGCTAGTAGCA-
-SCCTAGCAACAG
 A C T G A G T C A C T G A G T C A C G T C G T A A T C G A G C T C G T A A C T G A G T C C T G A A C G T
A C G T A T G C A G T C G T A C A G C T T C G A C T A G G A T C C T G A G T C A A G T C G C T A T C A G

PB0113.1_E2F3_2/Jaspar

Match Rank:9
Score:0.48
Offset:-6
Orientation:forward strand
Alignment:------GCGCTAGTAGCA
AGCTCGGCGCCAAAAGC-
 A C G T A C G T A C G T A C G T A C G T A C G T A C T G A G T C A C T G A G T C A C G T C G T A A T C G A G C T C G T A A C T G A G T C C T G A
G T A C A T C G G A C T C G A T G A T C C T A G A T C G G T A C C A T G T A G C G A T C C G T A G T C A C T G A T G C A A T C G A T G C A C G T

ZNF382(Zf)/HEK293-ZNF382.GFP-ChIP-Seq(GSE58341)/Homer

Match Rank:10
Score:0.47
Offset:-3
Orientation:reverse strand
Alignment:---GCGCTAGTAGCA-----
AADGAGVCANYASTACAGNC
 A C G T A C G T A C G T A C T G A G T C A C T G A G T C A C G T C G T A A T C G A G C T C G T A A C T G A G T C C T G A A C G T A C G T A C G T A C G T A C G T
G C T A T C G A C G A T C T A G C T G A C A T G T A G C G T A C C T G A C A T G G A T C G C T A T A G C G A C T C T G A A T G C T G C A C T A G C T G A G A T C