Information for 7-TYTGTGTG (Motif 19)

A C G T A G T C G A C T A C T G G A C T T A C G G A C T A C T G
Reverse Opposite:
G T A C C T G A A T G C C T G A A G T C C T G A C T A G G T C A
p-value:1e-4
log p-value:-1.057e+01
Information Content per bp:1.803
Number of Target Sequences with motif64.0
Percentage of Target Sequences with motif47.06%
Number of Background Sequences with motif13666.6
Percentage of Background Sequences with motif30.17%
Average Position of motif in Targets98.5 +/- 52.7bp
Average Position of motif in Background100.3 +/- 66.8bp
Strand Bias (log2 ratio + to - strand density)0.4
Multiplicity (# of sites on avg that occur together)1.68
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

PB0208.1_Zscan4_2/Jaspar

Match Rank:1
Score:0.73
Offset:-3
Orientation:reverse strand
Alignment:---TYTGTGTG-----
NNNNTTGTGTGCTTNN
 A C G T A C G T A C G T A C G T A G T C G A C T A C T G G A C T T A C G G A C T A C T G A C G T A C G T A C G T A C G T A C G T
A G C T C G T A C G A T C A G T C A G T C G A T C T A G A G C T A C T G C G A T A C T G A G T C A G C T C G A T A T G C C A T G

Smad2(MAD)/ES-SMAD2-ChIP-Seq(GSE29422)/Homer

Match Rank:2
Score:0.73
Offset:1
Orientation:forward strand
Alignment:TYTGTGTG-
-CTGTCTGG
 A C G T A G T C G A C T A C T G G A C T T A C G G A C T A C T G A C G T
A C G T A T G C G A C T A C T G C A G T G A T C A C G T T A C G T A C G

PB0166.1_Sox12_2/Jaspar

Match Rank:3
Score:0.72
Offset:-5
Orientation:reverse strand
Alignment:-----TYTGTGTG---
ANTCCTTTGTCTNNNN
 A C G T A C G T A C G T A C G T A C G T A C G T A G T C G A C T A C T G G A C T T A C G G A C T A C T G A C G T A C G T A C G T
C G T A G C A T A C G T A G T C A T G C C G A T A G C T C G A T T C A G A C G T T A G C G A C T T C A G G C A T A C G T A C G T

Smad4(MAD)/ESC-SMAD4-ChIP-Seq(GSE29422)/Homer

Match Rank:4
Score:0.69
Offset:-1
Orientation:forward strand
Alignment:-TYTGTGTG-
VBSYGTCTGG
 A C G T A C G T A G T C G A C T A C T G G A C T T A C G G A C T A C T G A C G T
T A C G A T C G T A G C G A T C A C T G A C G T A G T C A C G T C T A G A T C G

Smad3(MAD)/NPC-Smad3-ChIP-Seq(GSE36673)/Homer

Match Rank:5
Score:0.69
Offset:1
Orientation:forward strand
Alignment:TYTGTGTG-
-TWGTCTGV
 A C G T A G T C G A C T A C T G G A C T T A C G G A C T A C T G A C G T
A C G T A G C T G C A T A C T G A C G T A G T C A C G T C T A G T A C G

PB0060.1_Smad3_1/Jaspar

Match Rank:6
Score:0.68
Offset:-3
Orientation:reverse strand
Alignment:---TYTGTGTG------
NNTNNTGTCTGGNNTNG
 A C G T A C G T A C G T A C G T A G T C G A C T A C T G G A C T T A C G G A C T A C T G A C G T A C G T A C G T A C G T A C G T A C G T
C A G T A T C G C G A T T C A G T G C A G A C T A C T G C A G T A G T C A C G T T C A G T C A G G C T A G C A T C G A T G A C T C A T G

Sox3/MA0514.1/Jaspar

Match Rank:7
Score:0.67
Offset:-2
Orientation:forward strand
Alignment:--TYTGTGTG
CCTTTGTTTT
 A C G T A C G T A C G T A G T C G A C T A C T G G A C T T A C G G A C T A C T G
A T G C A G T C C G A T A C G T A C G T A T C G A C G T A G C T A G C T A G C T

PB0168.1_Sox14_2/Jaspar

Match Rank:8
Score:0.66
Offset:-5
Orientation:reverse strand
Alignment:-----TYTGTGTG--
NNNCCATTGTGTNAN
 A C G T A C G T A C G T A C G T A C G T A C G T A G T C G A C T A C T G G A C T T A C G G A C T A C T G A C G T A C G T
A T C G T G A C A C T G A G T C G A T C C G T A A C G T A C G T T A C G G C A T A T C G A G C T T C A G T G C A T C A G

SOX10/MA0442.2/Jaspar

Match Rank:9
Score:0.65
Offset:-3
Orientation:reverse strand
Alignment:---TYTGTGTG
NNCTTTGTTNN
 A C G T A C G T A C G T A C G T A G T C G A C T A C T G G A C T T A C G G A C T A C T G
A C G T A G C T T G A C C G A T C G A T C G A T T C A G C G A T A C G T G A C T G A C T

PB0130.1_Gm397_2/Jaspar

Match Rank:10
Score:0.64
Offset:-3
Orientation:reverse strand
Alignment:---TYTGTGTG-----
NNGCGTGTGTGCNGCN
 A C G T A C G T A C G T A C G T A G T C G A C T A C T G G A C T T A C G G A C T A C T G A C G T A C G T A C G T A C G T A C G T
C A G T A C G T C T A G T G A C C A T G A C G T T A C G A G C T C A T G A G C T A C T G A G T C A G T C C A T G A G T C G A C T