Information for 3-ACTGTAGGACST (Motif 2)

C G T A A G T C A C G T C A T G A C G T C G T A A C T G A C T G C G T A A G T C T A C G A C G T
Reverse Opposite:
C G T A A T G C A C T G A C G T A G T C A G T C A C G T C G T A G T A C C G T A A C T G A C G T
p-value:1e-18
log p-value:-4.301e+01
Information Content per bp:1.905
Number of Target Sequences with motif9.0
Percentage of Target Sequences with motif6.62%
Number of Background Sequences with motif12.7
Percentage of Background Sequences with motif0.03%
Average Position of motif in Targets93.4 +/- 54.8bp
Average Position of motif in Background106.5 +/- 80.4bp
Strand Bias (log2 ratio + to - strand density)-1.8
Multiplicity (# of sites on avg that occur together)2.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

PH0066.1_Hoxc11/Jaspar

Match Rank:1
Score:0.63
Offset:-2
Orientation:reverse strand
Alignment:--ACTGTAGGACST--
NNNTTTTACGACNTTN
 A C G T A C G T C G T A A G T C A C G T C A T G A C G T C G T A A C T G A C T G C G T A A G T C T A C G A C G T A C G T A C G T
G T A C G A C T C T G A C G A T C G A T C G A T C G A T C G T A A G T C C A T G C T G A A G T C G A C T C G A T G A C T C T G A

PH0065.1_Hoxc10/Jaspar

Match Rank:2
Score:0.63
Offset:-2
Orientation:reverse strand
Alignment:--ACTGTAGGACST--
ANNTTTTACGACNTNN
 A C G T A C G T C G T A A G T C A C G T C A T G A C G T C G T A A C T G A C T G C G T A A G T C T A C G A C G T A C G T A C G T
T G C A T A G C C T A G G C A T C A G T C G A T C G A T C G T A A G T C A C T G C T G A A G T C G A C T G C A T G C A T C G T A

PH0077.1_Hoxd12/Jaspar

Match Rank:3
Score:0.62
Offset:-3
Orientation:reverse strand
Alignment:---ACTGTAGGACST--
NNNATTTTACGACNNTN
 A C G T A C G T A C G T C G T A A G T C A C G T C A T G A C G T C G T A A C T G A C T G C G T A A G T C T A C G A C G T A C G T A C G T
G T C A C G T A C T A G C T G A C G A T C G A T C G A T C G A T C G T A A G T C C A T G C T G A A G T C A G T C G A C T C G A T C T A G

PH0047.1_Hoxa11/Jaspar

Match Rank:4
Score:0.61
Offset:-2
Orientation:reverse strand
Alignment:--ACTGTAGGACST--
NNGTTTTACGACTTTA
 A C G T A C G T C G T A A G T C A C G T C A T G A C G T C G T A A C T G A C T G C G T A A G T C T A C G A C G T A C G T A C G T
G T C A G A C T C T A G C G A T C A G T C G A T C G A T C G T A A G T C C A T G C T G A A G T C G A C T C G A T G A C T C G T A

PH0076.1_Hoxd11/Jaspar

Match Rank:5
Score:0.61
Offset:-3
Orientation:reverse strand
Alignment:---ACTGTAGGACST--
ANNATTTTACGACNTNA
 A C G T A C G T A C G T C G T A A G T C A C G T C A T G A C G T C G T A A C T G A C T G C G T A A G T C T A C G A C G T A C G T A C G T
G T C A C T A G C T A G C G T A C G A T C A G T C G A T C G A T C G T A A G T C C A T G C T G A A G T C A G T C G A C T C G A T C T G A

PH0067.1_Hoxc12/Jaspar

Match Rank:6
Score:0.60
Offset:-3
Orientation:reverse strand
Alignment:---ACTGTAGGACST--
GNNNTTTTACGACCTNA
 A C G T A C G T A C G T C G T A A G T C A C G T C A T G A C G T C G T A A C T G A C T G C G T A A G T C T A C G A C G T A C G T A C G T
C T A G G C T A T C G A C G T A C G A T C A G T C G A T C G A T C G T A A G T C C A T G C T G A A G T C A G T C A G C T C G T A C T G A

PB0181.1_Spdef_2/Jaspar

Match Rank:7
Score:0.59
Offset:0
Orientation:reverse strand
Alignment:ACTGTAGGACST----
CTACTAGGATGTNNTN
 C G T A A G T C A C G T C A T G A C G T C G T A A C T G A C T G C G T A A G T C T A C G A C G T A C G T A C G T A C G T A C G T
A G T C G C A T C G T A T G A C C G A T T C G A T A C G C A T G C G T A G A C T C T A G G A C T C G A T T C G A G C A T G A T C

PB0090.1_Zbtb12_1/Jaspar

Match Rank:8
Score:0.56
Offset:-2
Orientation:reverse strand
Alignment:--ACTGTAGGACST---
NNGATCTAGAACCTNNN
 A C G T A C G T C G T A A G T C A C G T C A T G A C G T C G T A A C T G A C T G C G T A A G T C T A C G A C G T A C G T A C G T A C G T
T C A G A C G T C T A G C G T A A G C T A G T C A C G T C T G A A C T G G C T A C G T A A G T C T G A C A G C T C G A T G T C A T A C G

PB0050.1_Osr1_1/Jaspar

Match Rank:9
Score:0.56
Offset:-4
Orientation:forward strand
Alignment:----ACTGTAGGACST
ATTTACAGTAGCAAAA
 A C G T A C G T A C G T A C G T C G T A A G T C A C G T C A T G A C G T C G T A A C T G A C T G C G T A A G T C T A C G A C G T
G C A T G C A T C G A T G C A T G T C A G A T C C T G A A C T G C G A T C T G A C T A G A G T C G C T A T G C A G C T A C T G A

HOXC10/MA0905.1/Jaspar

Match Rank:10
Score:0.56
Offset:0
Orientation:reverse strand
Alignment:ACTGTAGGACST
NTTTTACGAC--
 C G T A A G T C A C G T C A T G A C G T C G T A A C T G A C T G C G T A A G T C T A C G A C G T
C G T A C G A T G C A T G C A T C G A T C G T A G A T C C A T G C T G A A G T C A C G T A C G T