Information for 20-RAGGAAGAGAGW (Motif 22)

T C A G C T G A C A T G A T C G G T C A C T G A C T A G C T G A A C T G C T G A A C T G C G A T
Reverse Opposite:
G C T A A G T C G A C T A G T C G A C T A G T C A G C T C A G T A T G C G T A C G A C T A G T C
p-value:1e-2
log p-value:-5.752e+00
Information Content per bp:1.731
Number of Target Sequences with motif29.0
Percentage of Target Sequences with motif21.32%
Number of Background Sequences with motif5730.1
Percentage of Background Sequences with motif12.65%
Average Position of motif in Targets90.4 +/- 56.2bp
Average Position of motif in Background101.9 +/- 80.9bp
Strand Bias (log2 ratio + to - strand density)0.2
Multiplicity (# of sites on avg that occur together)1.79
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

PU.1(ETS)/ThioMac-PU.1-ChIP-Seq(GSE21512)/Homer

Match Rank:1
Score:0.63
Offset:-1
Orientation:forward strand
Alignment:-RAGGAAGAGAGW
AGAGGAAGTG---
 A C G T T C A G C T G A C A T G A T C G G T C A C T G A C T A G C T G A A C T G C T G A A C T G C G A T
C G T A T A C G T C G A A C T G A C T G C G T A C G T A T A C G A G C T T A C G A C G T A C G T A C G T

PU.1-IRF(ETS:IRF)/Bcell-PU.1-ChIP-Seq(GSE21512)/Homer

Match Rank:2
Score:0.61
Offset:1
Orientation:forward strand
Alignment:RAGGAAGAGAGW-
-CGGAAGTGAAAC
 T C A G C T G A C A T G A T C G G T C A C T G A C T A G C T G A A C T G C T G A A C T G C G A T A C G T
A C G T T G A C C T A G T C A G G T C A C G T A T C A G C G A T T C A G T C G A T G C A C T G A T A G C

SP1/MA0079.3/Jaspar

Match Rank:3
Score:0.60
Offset:-1
Orientation:reverse strand
Alignment:-RAGGAAGAGAGW
GGGGGCGGGGC--
 A C G T T C A G C T G A C A T G A T C G G T C A C T G A C T A G C T G A A C T G C T G A A C T G C G A T
T C A G C T A G C T A G A C T G A C T G G T A C C T A G A C T G C T A G T C A G T G A C A C G T A C G T

PB0124.1_Gabpa_2/Jaspar

Match Rank:4
Score:0.59
Offset:-5
Orientation:reverse strand
Alignment:-----RAGGAAGAGAGW
NNNNGGGGGAAGANGG-
 A C G T A C G T A C G T A C G T A C G T T C A G C T G A C A T G A T C G G T C A C T G A C T A G C T G A A C T G C T G A A C T G C G A T
C T A G A C G T A T C G T C G A C T A G C A T G T A C G C T A G C T A G C T G A C G T A C T A G T G C A G A T C C T A G A C T G A C G T

ZNF189(Zf)/HEK293-ZNF189.GFP-ChIP-Seq(GSE58341)/Homer

Match Rank:5
Score:0.59
Offset:1
Orientation:forward strand
Alignment:RAGGAAGAGAGW
-TGGAACAGMA-
 T C A G C T G A C A T G A T C G G T C A C T G A C T A G C T G A A C T G C T G A A C T G C G A T
A C G T C A G T A C T G T C A G T G C A G C T A A T G C T C G A A T C G G T C A T G C A A C G T

ZNF467(Zf)/HEK293-ZNF467.GFP-ChIP-Seq(GSE58341)/Homer

Match Rank:6
Score:0.58
Offset:-1
Orientation:forward strand
Alignment:-RAGGAAGAGAGW
TGGGGAAGGGCM-
 A C G T T C A G C T G A C A T G A T C G G T C A C T G A C T A G C T G A A C T G C T G A A C T G C G A T
G A C T C T A G C T A G C T A G A C T G T C G A C T G A C T A G C T A G C T A G G T A C G T C A A C G T

ETS1(ETS)/Jurkat-ETS1-ChIP-Seq(GSE17954)/Homer

Match Rank:7
Score:0.58
Offset:-1
Orientation:forward strand
Alignment:-RAGGAAGAGAGW
ACAGGAAGTG---
 A C G T T C A G C T G A C A T G A T C G G T C A C T G A C T A G C T G A A C T G C T G A A C T G C G A T
T C G A T A G C T G C A A C T G A C T G C G T A C G T A C T A G G A C T T A C G A C G T A C G T A C G T

PU.1:IRF8(ETS:IRF)/pDC-Irf8-ChIP-Seq(GSE66899)/Homer

Match Rank:8
Score:0.57
Offset:2
Orientation:forward strand
Alignment:RAGGAAGAGAGW--
--GGAAGTGAAAST
 T C A G C T G A C A T G A T C G G T C A C T G A C T A G C T G A A C T G C T G A A C T G C G A T A C G T A C G T
A C G T A C G T C T A G C T A G C G T A C G T A T A C G C G A T C T A G C T G A C T G A C G T A T A C G G A C T

Znf263(Zf)/K562-Znf263-ChIP-Seq(GSE31477)/Homer

Match Rank:9
Score:0.56
Offset:1
Orientation:reverse strand
Alignment:RAGGAAGAGAGW
-GGGAGGACNG-
 T C A G C T G A C A T G A T C G G T C A C T G A C T A G C T G A A C T G C T G A A C T G C G A T
A C G T C T A G A C T G A C T G C G T A A C T G A T C G C G T A A T G C A G C T T A C G A C G T

ZNF263/MA0528.1/Jaspar

Match Rank:10
Score:0.56
Offset:-1
Orientation:forward strand
Alignment:-RAGGAAGAGAGW--------
GGAGGAGGAGGGGGAGGAGGA
 A C G T T C A G C T G A C A T G A T C G G T C A C T G A C T A G C T G A A C T G C T G A A C T G C G A T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T
C T A G C T A G C T G A C A T G T A C G G C T A C A T G T C A G T C G A T C A G C T A G C T A G C T A G T C A G C T G A C T A G C T A G C T G A C T A G C T A G C T G A